Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zeugodacus_20cucurbitae_20[refseq_20GCF_5F000806345.1_202014-12-23] 5,572 sequences; 374,820,345 total letters Query= NC_026609.1 Length=74806 Score E Sequences producing significant alignments: (Bits) Value seq273 82.4 4e-11 >seq273 Length=32108 Score = 82.4 bits (90), Expect = 4e-11 Identities = 87/115 (76%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 62816 CTTTTTAATATAGTTCTCCATCTTATTGAAGGCCTCAATATACTTCAGCTTGAACTCAAG 62875 || || ||| | || ||||| | ||| || ||||||||||| ||||| ||||||| | Sbjct 28276 CTGTTGAATTTCTTTTTCCATTTGATTAAAAGCCTCAATATATTTCAGTTTGAACTGCAA 28335 Query 62876 AGCCTTCTTACCGGTGAAACCCATAGCCAGTAGCGTGAACCCATCACGATTCATG 62930 ||||| | ||| ||||| ||||| || | || ||||| || || ||||||||| Sbjct 28336 TGCCTTTTGACCAGTGAACCCCATTGCTAATAAAGTGAAGCCGTCGCGATTCATG 28390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 239238152532764