Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zeugodacus_20cucurbitae_20[refseq_20GCF_5F000806345.1_202014-12-23] 5,572 sequences; 374,820,345 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq162 122 1e-22 >seq162 Length=508180 Score = 122 bits (134), Expect = 1e-22 Identities = 184/262 (70%), Gaps = 0/262 (0%) Strand=Plus/Minus Query 168457 ATCCTTACCACCCATGAGACGCGTACCAAACTGACCACACGGCTCAAGAAGATTGATATT 168516 ||| ||||||||| ||||||||||| |||||||||| |||||| || | ||| ||||| Sbjct 425996 ATCTTTACCACCCTGTAGACGCGTACCGAACTGACCACGCGGCTCGAGTAAATTAATATT 425937 Query 168517 GTTTGAACCCATGTAGTCATTCGCCAACTTGACAATCGTGTCCGCGAGAGAGACTTCACC 168576 ||||| || | |||| | |||||| ||||| || ||| || || || | || || Sbjct 425936 ATTTGAGCCAACATAGTTTTGCGCCAAATTGACTATGGTGGCCTGCAGTGACATCTCTCC 425877 Query 168577 GTGGTGGTACGCACTCTTCTCTGCGACAAATGCCGCCAACTGCGCCACTTTCATCTCATC 168636 || ||||| || | | || || ||| | | | ||| ||||| ||||||| ||| Sbjct 425876 ATGATGGTAGGCGGACATTTCAGCCACAGAACCAGACAATTGCGCAACTTTCACTTCACG 425817 Query 168637 CTTGAGATTCTTGTGGAAGCATGCGTACATAACCTTGCGTTGCGAAGGCTTGAGACCATC 168696 ||| || | ||| || | | ||||||| |||||||| |||||| | |||||| Sbjct 425816 TTTGTCGTTACGCTTGAAACAGGTGAACATAACTTTGCGTTGGCCAGGCTTAAAACCATC 425757 Query 168697 CGCCATGTGTGCGATAGAACGC 168718 | | | || ||||||||| Sbjct 425756 CACGAGACATGGTATAGAACGC 425735 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583220175885280