Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zeugodacus_20cucurbitae_20[refseq_20GCF_5F000806345.1_202014-12-23] 5,572 sequences; 374,820,345 total letters Query= NC_028990.1 Length=38886 Score E Sequences producing significant alignments: (Bits) Value seq884 244 3e-60 >seq884 Length=19560 Score = 244 bits (270), Expect = 3e-60 Identities = 387/555 (70%), Gaps = 0/555 (0%) Strand=Plus/Plus Query 10069 ATTGATGGTGCATTAAATAGGATTGATACATTAAACAATAGTACACGTGCATTTGAGAAC 10128 |||||||| || | ||| | | ||||| |||||||| | |||| |||||| || Sbjct 16652 ATTGATGGGGCTATCAATCGCGTAGATACGTTAAACAACGCAAACCGTGTATTTGAAAAT 16711 Query 10129 ATGGGTGTAGCTACTGGCGATATAACCAAGAATATGGATAAACTACAAGAGGCAACACGT 10188 ||||| | | || | || | | | |||| ||||||| || | || | | Sbjct 16712 ATGGGCTTTTCAGCTAGTGAAACATCAAAGACAATGGATAGCTTAAAGAAGAGTATTCAA 16771 Query 10189 GGTTTACCAACAGCCTTAGATAGTGCAGTGAGTAACGTTCAGTTACTAACTGCATCAACA 10248 || ||||| ||| | ||||| || ||| | | ||||| ||| | || | || ||| Sbjct 16772 GGATTACCCACACCATTAGACAGCGCAATTAAAGGTGTTCAATTAATTGCTTCGTCTACA 16831 Query 10249 GATGATATGGGACTCTCAGTTGACGTATTTAAAGCAATGAATGATGCTATCCTAGGTTTT 10308 |||| | ||| |||| | | || ||| | ||| ||| |||||| || ||| Sbjct 16832 AATGACTTAGGAAAATCAGAACAGATTTTCGCAGCTTTAAATAATGGTATCCTCGGCTTT 16891 Query 10309 GGTGGGGATGCACAAATGGTTGACAGTGCGGTTGTTCAGTTATCACAATCATTCTCAAAC 10368 |||||| |||| | ||||| |||| |||| | | ||| ||||||||||||| ||||| Sbjct 16892 GGTGGGTCTGCAGAGATGGTAGACAATGCGATCATCCAGCTATCACAATCATTTTCAAAT 16951 Query 10369 GGTAAAGTAGATGCGCAAACGTGGAACTCAATGATTAATAGTGGTTTAGGACCTACCCTT 10428 |||||||||||||||||||| ||||||||||||||||| |||||||| || || | || Sbjct 16952 GGTAAAGTAGATGCGCAAACTTGGAACTCAATGATTAACAGTGGTTTGGGCCCAGCTCTA 17011 Query 10429 AACGCATTAGCAAAAGAAATGGGTATAACGACAGGTGCATTAAAGGATGGGTTATCTTCA 10488 ||||||||||| ||| ||||||| |||| | ||| | || || || | ||| Sbjct 17012 AACGCATTAGCGAAACAAATGGGGTTAACTGCTGGTCAGATGAAAGAAGGTCTCTCTGAT 17071 Query 10489 GGTAGCGTATCTGTAAAAGACTTCCAAGATGCCTTAGTTAAAATGGATAAAGAAGGTGGT 10548 ||| | || || |||| || ||||| | || ||||| || |||||||||| ||| Sbjct 17072 GGTTCAATTTCAGTTGAAGAATTTCAAGACTCTCTAATTAAATTGAATAAAGAAGGCGGT 17131 Query 10549 GGCGGTCTTAAGTCATTAGAAAAGATAGCTAAAGATAGTACACAAGGTTTTGGTACTGCA 10608 || || ||||| || ||||| |||| |||||||| ||| |||| || || | | Sbjct 17132 GGAGGCCTTAAATCGTTAGAGCAGATTGCTAAAGACTCTACTGCAGGTATTAAAACCGGA 17191 Query 10609 ATAGCTAACATGAAA 10623 | |||||||||||| Sbjct 17192 TTGGCTAACATGAAA 17206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124305374479872