Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zeugodacus_20cucurbitae_20[refseq_20GCF_5F000806345.1_202014-12-23] 5,572 sequences; 374,820,345 total letters Query= NC_029078.1 Length=34997 Score E Sequences producing significant alignments: (Bits) Value seq641 93.3 9e-15 >seq641 Length=27874 Score = 93.3 bits (102), Expect = 9e-15 Identities = 153/217 (71%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 26232 TCGGTTGTCGCAAAATTATTCCCTAAAGCAACAATAACCGACCCTAGACGGGTAAAATCT 26291 |||||||||||||| |||||||||||| ||||||| || || |||| || || |||| | Sbjct 11094 TCGGTTGTCGCAAAGTTATTCCCTAAATCAACAATCACAGAACCTA-ACTTGTCAAAT-T 11151 Query 26292 TCGCCACT--CATCTTTGTGATGTTGGCGAATTTTGCAAGCGTGGTTGCCCCTTCTTCTG 26349 || | ||| ||| |||||||| ||| || | | ||||| ||||||||| Sbjct 11152 CCGTTTGTGGCATTCCTGTAATGTTGGCTAATCGAGCTAAAGCAGTTGCTGCTTCTTCTG 11211 Query 26350 CACTGAGATTGGTCGCCTCACCAAGATCAATCATGGTGCGTGTAAATTGAACAATATGTT 26409 |||| | || || | ||| || | ||||||||| || || || ||| | || || Sbjct 11212 CACTCATGTTCGTTGACTCGCCTAAATCAATCATTGTCTTGGTGAAGCCAACTACATTTT 11271 Query 26410 CCGACTCAATCCCAAGCTGACCCGCAGCTTCTGCAAC 26446 | | ||||| | ||| || || ||||||||||| Sbjct 11272 TAGTTTTGATCCCTAACTGCCCTGCTGCTTCTGCAAC 11308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 111861397921176