Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zeugodacus_20cucurbitae_20[refseq_20GCF_5F000806345.1_202014-12-23] 5,572 sequences; 374,820,345 total letters Query= NC_031051.1 Length=37933 Score E Sequences producing significant alignments: (Bits) Value seq884 215 1e-51 >seq884 Length=19560 Score = 215 bits (238), Expect = 1e-51 Identities = 393/573 (69%), Gaps = 2/573 (0%) Strand=Plus/Plus Query 7653 ATTGATGGTGCATTAAATAGGATTGATACATTAAACAATAGTACACGTGCATTTGAGAAC 7712 |||||||| || | ||| | | ||||| |||||||| | |||| |||||| || Sbjct 16652 ATTGATGGGGCTATCAATCGCGTAGATACGTTAAACAACGCAAACCGTGTATTTGAAAAT 16711 Query 7713 ATGGGTGTAGCTACTGGTGATATAACCAAGAACATGGATAAGCTACAAGAGGCA-ACACG 7771 ||||| | | || |||| | | | |||| ||||||| ||| |||| | | | Sbjct 16712 ATGGGCTTTTCAGCTAGTGAAACATCAAAGACAATGGATA-GCTTAAAGAAGAGTATTCA 16770 Query 7772 TGGTCTACCAACAGCCTTAGACAGTGCAGTGAGTAACGTTCAGTTGTTAACAGCATCAAC 7831 || |||| ||| | |||||||| ||| | | ||||| || | | | || || Sbjct 16771 AGGATTACCCACACCATTAGACAGCGCAATTAAAGGTGTTCAATTAATTGCTTCGTCTAC 16830 Query 7832 AGATGATATGGGATTATCAGTTGACGTATTTAAAGCAATGAATGATGCCATCCTAGGGTT 7891 | |||| | ||| ||||| | | || ||| | ||| ||| ||||| || || Sbjct 16831 AAATGACTTAGGAAAATCAGAACAGATTTTCGCAGCTTTAAATAATGGTATCCTCGGCTT 16890 Query 7892 TGGTGGGGACGCACAGATGGTTGACAGCGCGGTTGTTCAGTTATCGCAATCGTTCTCAAA 7951 ||||||| ||| ||||||| |||| ||| | | ||| |||| ||||| || ||||| Sbjct 16891 TGGTGGGTCTGCAGAGATGGTAGACAATGCGATCATCCAGCTATCACAATCATTTTCAAA 16950 Query 7952 TGGTAAGGTAGATGCGCAAACGTGGAACTCAATGATTAACAGTGGTTTAGGACCTACCCT 8011 |||||| |||||||||||||| |||||||||||||||||||||||||| || || | || Sbjct 16951 TGGTAAAGTAGATGCGCAAACTTGGAACTCAATGATTAACAGTGGTTTGGGCCCAGCTCT 17010 Query 8012 TAATGCCTTAGCAAAAGAAATGGGCATGACAACAGGGGCATTAAAAGAAGGATTGTCATC 8071 || || ||||| ||| ||||||| | || | || | |||||||| | || Sbjct 17011 AAACGCATTAGCGAAACAAATGGGGTTAACTGCTGGTCAGATGAAAGAAGGTCTCTCTGA 17070 Query 8072 AGGTAGCATATCAGTAAGACAGTTCCAAGACGCCTTAGTTAAAATGGATAAAGAGGGTGG 8131 ||| || ||||| | | || |||||| | || ||||| || ||||||| || || Sbjct 17071 TGGTTCAATTTCAGTTGAAGAATTTCAAGACTCTCTAATTAAATTGAATAAAGAAGGCGG 17130 Query 8132 TGGCGGTCTTAAGTCATTAGAAAAGATAGCTAAAGATAGTACACAAGGTTTTGGTACTGC 8191 ||| || ||||| || ||||| |||| |||||||| ||| |||| || || | Sbjct 17131 TGGAGGCCTTAAATCGTTAGAGCAGATTGCTAAAGACTCTACTGCAGGTATTAAAACCGG 17190 Query 8192 GATAGCCAACATGAAATCAGCTGTTACTCGTGG 8224 | || ||||||||| | || || |||||| Sbjct 17191 ATTGGCTAACATGAAAACTGCGATTGTTCGTGG 17223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 121255976264280