Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zeugodacus_20cucurbitae_20[refseq_20GCF_5F000806345.1_202014-12-23] 5,572 sequences; 374,820,345 total letters Query= NC_031280.1 Length=104906 Score E Sequences producing significant alignments: (Bits) Value seq45 95.1 8e-15 >seq45 Length=1794600 Score = 95.1 bits (104), Expect = 8e-15 Identities = 91/117 (78%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 70400 CAATTCTTTGTGGAAGATGGTAAGCTTTCTTGCCAGCTATATCAACGTAGTGCTGACATT 70459 ||||| ||||| | |||| || | ||||| || |||| ||||||||||||||||| Sbjct 1449679 CAATTTTTTGTTGCCAATGGAGAGTTGTCTTGTCAATTATACCAACGTAGTGCTGACATG 1449738 Query 70460 TTACTTGGTGTGCCATTCAATATTGCATCATATGCCTTACTTACACATCTTATTGCT 70516 | | ||||| |||||||||||||||||||| || || ||||| || | |||||| Sbjct 1449739 GGATTAGGTGTACCATTCAATATTGCATCATACGCGTTGCTTACCTATATGATTGCT 1449795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 335551611561964