Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zeugodacus_20cucurbitae_20[refseq_20GCF_5F000806345.1_202014-12-23] 5,572 sequences; 374,820,345 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq7 264 1e-65 >seq7 Length=4380649 Score = 264 bits (292), Expect = 1e-65 Identities = 481/694 (69%), Gaps = 14/694 (2%) Strand=Plus/Plus Query 23343 ATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTATTAGTTTTAC 23402 ||| || |||||||| ||||| | |||| | | | || ||||| |||| ||||| Sbjct 4094570 ATCAGCCACAAATTCTATATAATCGGACATTGATTTGCAATTCATACCAATTAAATTTAC 4094629 Query 23403 TGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATTTGAAC 23462 || | || ||| ||||||| || ||||| |||||| || ||| |||| || Sbjct 4094630 GGGCAAAGCGTCAGTTAAGAATTCTTGCTCAATTTTAACAGCTTCGGAAATGATTTCAAT 4094689 Query 23463 AATAACTTCTTCACTAGGTGGATATTTTAAATACTTAAACAATAAACATGCAAAATCACA 23522 ||| ||| | ||| || | | | |||| | ||||| |||||||| |||||||| Sbjct 4094690 AATTCGTTCATTACTTGGCTTCTGTATCAAATGTTGAAACATCAAACATGCGAAATCACA 4094749 Query 23523 ATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCC 23582 ||| || || || || | || | ||||| ||||| ||||| || |||||||| || Sbjct 4094750 ATGCAGACCCTCGTCTCGTGAGATTAGCTCATTGGAAAACGTTAAGCCAGGCATTAAACC 4094809 Query 23583 TCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGC 23642 |||||||||| ||| || || | ||||| ||| || |||||||| || ||||| Sbjct 4094810 ACGTTTTTTAAGCCAGAAGATCGACGCAAAACTTCCACTGAAAAAAATACCTTCCACAGC 4094869 Query 23643 CGCAAAGGCCACAAGACGTGTACCAAATGTTGC--ATTATAATCAGAAATCCAttttttt 23700 ||||| || | | |||| |||||| |||| | | | | |||||||| | Sbjct 4094870 TGCAAATGCAATTACACGTTCACCAAAGTTTGCCGACTTTGA--GGAAATCCAAGCAAGT 4094927 Query 23701 GTCCAATTAGCCTTCAATTTTAC-ACACTCAATTGTTTCAATTGCTTTTAAGAGAAAAGT 23759 | ||||| ||||| ||||| || | || |||||||| || || || | || ||| Sbjct 4094928 GCCCAATCTGCCTTACGCTTTACGGCAGGC-ATCGTTTCAATAGCATTGAATA-AATAGT 4094985 Query 23760 T-TTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAA 23818 | ||| || ||| | ||||||||||| |||| || |||||||||||| ||||| | Sbjct 4094986 TCCTTTGTTTCGAATCCTTAATATATGTATCGATTAATATACTATACATTTCGGAATGCA 4095045 Query 23819 TATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCAT 23878 || || |||||||| ||||| ||||| ||||| | || || | | ||| || || | Sbjct 4095046 CGTTCTCCATAGCAATTTGAAATCCATAGAAACAACGTGCCTCTGTAACTTGGACCTCCT 4095105 Query 23879 TAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAA 23938 | |||| || | ||||||| || ||||||||||||||| || ||||| || || | Sbjct 4095106 GACTGAATCGTTCAACTAAATTCTCATTAACAATACCATCAGATGCGGCAAAAAAGGCTA 4095165 Query 23939 GAACATATTTTATAAAATGTCTTTCA---TCAGTTGATAATTTTTTCCAATCATTAATAT 23995 || | | || ||||| | |||| |||| ||| | | |||||||| |||| Sbjct 4095166 ATACGTGTGAGATGAAATGCCGTTCATTGTCAG-TGAGA--CGTGCCCAATCATCCATAT 4095222 Query 23996 CTTTTGATAAATCAACTTCATCAACTGTCCAAAA 24029 |||| || | ||| ||||| |||||||||||||| Sbjct 4095223 CTTTAGAAAGATCCACTTCCTCAACTGTCCAAAA 4095256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521451678360800