Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zootermopsis_20nevadensis_20[genbank_20GCA_5F000696155.1_202014-06- 05] 31,662 sequences; 485,009,472 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq124 120 2e-22 >seq124 Length=507148 Score = 120 bits (132), Expect = 2e-22 Identities = 231/333 (69%), Gaps = 6/333 (2%) Strand=Plus/Minus Query 101762 GCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATA 101821 |||| |||| | ||||| | | ||| ||||||||||||||||| ||||| | ||||| Sbjct 494729 GCAACCATGTATGTTAACAATGCATAACTAGCAATGTTAAATGGTACTCCAAGGCCCATG 494670 Query 101822 TCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAAAATTGACTT 101881 || ||||| | |||||||| || ||| | || | | ||| ||||| |||||| Sbjct 494669 TCTGCTGAACGCTGATACAGCTGGCAGTACAGTTCATCTTCAGCAACATAGAATTGA-AC 494611 Query 101882 AATACA-TGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCAAGCACACAT 101940 || || ||||| || || | ||||||| || || || ||||||| | |||||| Sbjct 494610 AAGGCAGTGACATGGTGGAAGAGCCATTTTTGGTATATCAATGGCATTCCATGAACACAT 494551 Query 101941 TAACATCCTTCTATCTGTAGGGTTT-GTTTTTATAGTATCAATCAACTGTTTTAATTGGT 101999 | ||| | | ||| || ||||| | ||| | || | || | || | ||||| | Sbjct 494550 GATCATGCGACGATC-ATATGGTTTAGATTTCAGTGTGTTGATTACTTGCTGCAATTGAT 494492 Query 102000 CAACTCCTTCTCCTTTATAATC-GCGCCCAACACCTTTATATTCTGCTCCGAAATGCCTC 102058 |||| |||| || ||| || | || || | |||| || || ||||| | | Sbjct 494491 CAACACCTTGACCAGAATAGTCAGTATTCATGTCC-ATGTATTTGGCCCCAAAATGACGC 494433 Query 102059 CACTGAAATCCATACACAGGTCCAAGATCTCCT 102091 |||||||||||||||||||| ||||| |||||| Sbjct 494432 CACTGAAATCCATACACAGGACCAAGGTCTCCT 494400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361111800161162