Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zootermopsis_20nevadensis_20[genbank_20GCA_5F000696155.1_202014-06- 05] 31,662 sequences; 485,009,472 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq124 140 2e-28 >seq124 Length=507148 Score = 140 bits (154), Expect = 2e-28 Identities = 226/320 (71%), Gaps = 4/320 (1%) Strand=Plus/Minus Query 97138 GTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATATCAGCTGATCTT 97197 ||||| | | ||| |||||||||||||| || || || || ||||| || ||||| | Sbjct 494717 GTTAACAATGCATAACTAGCAATGTTAAATGGTACTCCAAGGCCCATGTCTGCTGAACGC 494658 Query 97198 TGATATAACTGACAGGAAAGCTTTCCATCACACACATAAAACTGACTCAATACA-TGACA 97256 ||||| | ||| ||| | || | | ||| ||||| || ||| ||| || ||||| Sbjct 494657 TGATACAGCTGGCAGTACAGTTCATCTTCAGCAACATAGAATTGAA-CAAGGCAGTGACA 494599 Query 97257 GGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAAGCACACATCAACATTCTTCT 97316 || || | ||||||||||| | ||| | | ||||||| | |||||| | ||| | | Sbjct 494598 TGGTGGAAGAGCCATTTTTGGTATATCAATGGCATTCCATGAACACATGATCATGCGACG 494539 Query 97317 ATCGGTTGGGTTTGTGTGTATGGTATTAATTATCTGCTTTAATTGATCAACGCCTTCTCC 97376 ||| ||| || | | | || || |||| |||| ||||||||||| |||| || Sbjct 494538 ATCATATGGTTTAGATTTCAGTGTGTTGATTACTTGCTGCAATTGATCAACACCTTGACC 494479 Query 97377 ACCATAAT-TGTGCTTAAGACCTTGATATTCTGCTCCAAAATGCCTCCATTGGAATCCAT 97435 | ||| | || | | | || || |||| || |||||||| | ||| || ||||||| Sbjct 494478 AGAATAGTCAGTATTCATGTCCATG-TATTTGGCCCCAAAATGACGCCACTGAAATCCAT 494420 Query 97436 AAACAGGTCCAAGGTCTCCT 97455 | ||||| |||||||||||| Sbjct 494419 ACACAGGACCAAGGTCTCCT 494400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346650182773340