Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zootermopsis_20nevadensis_20[genbank_20GCA_5F000696155.1_202014-06- 05] 31,662 sequences; 485,009,472 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq70 141 1e-28 seq623 127 3e-24 seq583 116 6e-21 seq950 102 1e-16 seq394 98.7 1e-15 seq352 86.0 9e-12 >seq70 Length=429657 Score = 141 bits (156), Expect = 1e-28 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||| | ||| | ||||| || || || ||||| || ||| | || ||||| || | Sbjct 142350 ATGCAAGTCTTTGTGAAGACTCTCACTGGAAAAACCATTACTCTTGAAGTTGAACCATCT 142409 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || || || || |||| |||||||| || || ||||| || || ||| ||||| Sbjct 142410 GACACCGTTGAAAACTTGAAACGAAAAATTCAGGACAAGGAAGGAATTCCTCCTCATCAA 142469 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | | |||||||| || || ||||| |||||| | || || ||| |||||| || Sbjct 142470 CAACGTTTAATTTTTGCTGGCAAGCAATTGGAGGATGGCCGCACCTTATCAGATTACAAC 142529 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGT 124766 || || ||||||||||| |||| |||||| | || | ||||||||| Sbjct 142530 ATCCATAAAGAATCAACCCTGCACTTGGTTCTTCGCCTCCGAGGTGGT 142577 >seq623 Length=111817 Score = 127 bits (140), Expect = 3e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | ||||| || ||||| || || || ||| | ||| | || || | Sbjct 107874 ATGCAGATTTTTGTGAAGACCCTGACAGGGAAGACCATCACTCTGGAGGTAGAGCCAGCT 107815 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| || | ||| || || || || || |||||||| || |||| || Sbjct 107814 GATACCATTGAGAACGTGAAAGCAAAGATCCAGGACAAGGAAGGTATCCCTCCTGGCCAG 107755 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | ||||| ||||| || || ||||| |||||| | || || ||| |||||| || Sbjct 107754 CAGCGACTTATCTTTGCTGGCAAGCAATTGGAGGATGGCCGTACCTTATCAGATTACAAC 107695 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGT 124766 || || ||||||||||| ||||||||||| | || | ||||||||| Sbjct 107694 ATCCAGAAAGAATCAACCCTGCATTTGGTTCTTCGCCTCCGAGGTGGT 107647 Score = 98.7 bits (108), Expect = 1e-15 Identities = 138/191 (72%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | ||||| || || || ||||| || | | | || | ||| | | Sbjct 110519 ATGCAAATCTTTGTGAAGACTCTCACTGGAAAAACCATTATTCTTGAAGTGGAAACGTCT 110460 Query 124599 GATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || || ||| || ||||| || |||||||| || || ||||| || || |||||||| Sbjct 110459 GACACCATTGAAAACGTTAAAGCA-AAAATTCAGGACAAGGAAGGAATTCCTCCTGATCA 110401 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||| | | |||||||||||||| || || || ||| |||| ||| | || || || Sbjct 110400 ACAACGTTTAATTTTTGCAGGAAAGCAGTTGGAAGATGGTCGTACACTTTCTGACTACAA 110341 Query 124718 TATTCAAAAAG 124728 ||| || |||| Sbjct 110340 TATACAGAAAG 110330 >seq583 Length=527131 Score = 116 bits (128), Expect = 6e-21 Identities = 139/189 (74%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| || |||| || ||||| || ||||||||||| | || |||| || Sbjct 232858 AATGCAAATTTTCGTAAAAACCCTAACGGGTAAAACTATAACCCTCGAAGTTGAGGCGTC 232917 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| || ||| | || || |||||||||||||||||||| ||||| || || Sbjct 232918 GGATACCATAGAAAATGTCAAGGCTAAGATTCAAGATAAAGAAGGTATCCCACCGGACCA 232977 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||| | | || ||||| || || |||||||| ||| |||| || || |||||||| Sbjct 232978 ACAGCGATTGATCTTTGCTGGGAAGCAATTAGAAGATGGTCGCACGTTGTCGGATTATAA 233037 Query 124718 TATTCAAAA 124726 |||||| || Sbjct 233038 TATTCAGAA 233046 >seq950 Length=836093 Score = 102 bits (112), Expect = 1e-16 Identities = 149/210 (71%), Gaps = 3/210 (1%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| || ||| | ||||| || |||||||| || || || | || | || || Sbjct 300873 AATGCAGATCTTTGTTAAGACTCTGACAGGCAAGACAATCACATTGGAAGTAGAGGCTTC 300814 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 |||||| ||| ||| | ||| || ||||| || |||||||| || ||||||||||| Sbjct 300813 TGATACGATTGAGAATGTTAAAGCCAAGATTCAGGACAAAGAAGGAATTCCACCTGATCA 300754 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||| | || || ||||| || || || | |||||| | || ||| | ||||| || Sbjct 300753 ACAGCGACTGATCTTTGCTGGCAAGCAGCTGGAGGATGGACGCACACT---GGATTACAA 300697 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGT 124747 | || ||||||||||| | ||| |||| Sbjct 300696 CAACCAGAAAGAATCAACACTCCATCTGGT 300667 Score = 91.5 bits (100), Expect = 2e-13 Identities = 163/237 (69%), Gaps = 2/237 (1%) Strand=Plus/Minus Query 124534 ATACA--ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA 124591 ||||| ||||| || || | || || || || ||||| || || ||| |||| | || Sbjct 302385 ATACATCATGCAGATTTTCGTGAAAACTCTGACTGGCAAGACCATTACTTTAGAAGTGGA 302326 Query 124592 AGCAAATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACC 124651 |||| |||||| ||| ||| | ||| || || ||||| || ||||| || ||||| Sbjct 302325 AGCATCTGATACGATTGAGAATGTGAAAGCCAAGATCCAAGACAAGGAAGGAATTCCACC 302266 Query 124652 TGATCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGA 124711 || || || | || || ||||| || || || | |||||| | ||||| | || Sbjct 302265 AGACCAGCAGCGACTGATCTTTGCTGGCAAGCAGCTGGAGGATGGCCGAACCCTCTCTGA 302206 Query 124712 TTATAATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||||||| || || ||||| || | ||| | || | | | |||||||| || Sbjct 302205 TTATAATATCCAGAAGGAATCTACACTTCATCTCGTCCTCAGGCTTCGAGGTGGCAT 302149 Score = 89.7 bits (98), Expect = 8e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| |||||| | || || | ||||| ||||| || ||| | || | || || | Sbjct 297705 ATGCAGATATTTGTCAAAACCTTGACAGGAAAAACCATTACTCTGGAAGTAGAGGCTTCT 297646 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||||||| || | ||| || || || || |||||||| || ||||| || || Sbjct 297645 GATACAATTGAGAACGTGAAAGCCAAGATCCAGGACAAAGAAGGCATTCCACCAGACCAG 297586 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | || || ||||| || || || | |||||| | ||||| | |||||||||| Sbjct 297585 CAGCGACTGATCTTTGCTGGCAAGCAGCTGGAGGATGGCCGAACCCTCTCAGATTATAAT 297526 Query 124719 ATTCAAAAAGAATCAAC 124735 || || ||||| || || Sbjct 297525 ATCCAGAAAGAGTCTAC 297509 >seq394 Length=806705 Score = 98.7 bits (108), Expect = 1e-15 Identities = 90/114 (79%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 124640 AGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCG 124699 |||||| || |||||||| || | || |||||||| ||||||||| | || ||| |||| Sbjct 96858 AGGTATCCCCCCTGATCAGCAGCGCCTGATTTTTGCTGGAAAACAACTTGAAGATGGTCG 96917 Query 124700 AACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACG 124753 ||||||| ||||||||||||||||| ||||| || | || | ||| |||| Sbjct 96918 AACATTATCTGATTATAATATTCAAAAGGAATCTACACTTCACCTAGTTCTACG 96971 >seq352 Length=269356 Score = 86.0 bits (94), Expect = 9e-12 Identities = 135/191 (71%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | ||||| || || || ||||| | ||| | || | ||| | | Sbjct 29494 ATGCAAATCTTTGTGAAGACTCTCACTGGAAAAACCGTTACTCTTGAAGTGGAAACGTTT 29435 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAA-GATAAAGAAGGTATACCACCTGATCA 124657 || || ||| | | |||| | ||| |||| || || ||||| || || |||||||| Sbjct 29434 GACACCATTGAAGACGTGAAAC-GCAAACTCAACGACAAGGAAGGAATTCCCCCTGATCA 29376 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||| | | |||||||||||||| || || || ||| |||| ||| | || || || Sbjct 29375 ACAACGTTTAATTTTTGCAGGAAAGCAGTTGGAAGATGGTCGTACAATTTCTGACTACAA 29316 Query 124718 TATTCAAAAAG 124728 ||| || |||| Sbjct 29315 TATACAGAAAG 29305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755157009401600