Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zootermopsis_20nevadensis_20[genbank_20GCA_5F000696155.1_202014-06- 05] 31,662 sequences; 485,009,472 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq1143 86.0 1e-11 >seq1143 Length=599768 Score = 86.0 bits (94), Expect = 1e-11 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 135727 GGTATATGCGATAATTTACTGACGTCTATTGTAAGAGCCTGGGATACAAACAAACCACTC 135786 ||| |||| || || || ||||| | | ||| | |||| ||||| || |||||| | Sbjct 219002 GGTCTATGTGACAACTTGCTGACCTGTGTTGCACGAGCATGGGACCTGAAGAAACCATTG 218943 Query 135787 ATTTTCTGTCCTGCAATGAATACTCTTATGTGGGAACATCCTATTACAGAAAAACATATA 135846 | |||||||| ||||||||||||| ||||||||| || || || | | || || Sbjct 218942 TTATTCTGTCCAGCAATGAATACTCATATGTGGGAGCACCCAGCCACTGCCACTCACATT 218883 Query 135847 GATACGTTAAAATATATGGGTTTCATAGAAATAGAATGCATAGaaaaaaaaCTAGCATGT 135906 | ||| | || || ||| | | |||| | |||||| | |||| || ||| Sbjct 218882 GCTACACTGAAGAATTGGGGCTATACAGAAGTTCCATGCATTGCCAAAACTCTCATCTGT 218823 Query 135907 GGAGACGTAGGAAATGGTGCTATGGCAGAAGT 135938 |||||| ||| |||||||||||| ||||| Sbjct 218822 GGAGACACAGGGCTTGGTGCTATGGCTGAAGT 218791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 922831421786480