Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zootermopsis_20nevadensis_20[genbank_20GCA_5F000696155.1_202014-06- 05] 31,662 sequences; 485,009,472 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq950 93.3 3e-14 seq623 87.8 1e-12 >seq950 Length=836093 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || ||||| || || || || | ||| ||| ||||| || || || || || Sbjct 302152 CCACCTCGAAGCCTGAGGACGAGATGAAGTGTAGATTCCTTCTGGATATTATAATCAGAG 302211 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || |||| ||||||||| || || || || ||||||||||| || Sbjct 302212 AGGGTTCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATCAGTCGCTGCTGGTCTGGTGGA 302271 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGAC 34341 | | |||||||| ||| || ||||| | || | |||| ||| | | ||| || Sbjct 302272 ATTCCTTCCTTGTCTTGGATC-TTGGCTTTCACATTCTCAATCGTATCAGATGCTTCCAC 302330 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | || ||||| ||||| || ||||||||||| || |||||||| Sbjct 302331 TTCTAAAGTAATGGTCTTGCCAGTCAGAGTTTTCACGAAAATCTGCAT 302378 Score = 89.7 bits (98), Expect = 3e-13 Identities = 136/191 (71%), Gaps = 2/191 (1%) Strand=Plus/Plus Query 34200 CTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAA 34259 ||||||| ||||||||||| |||| ||| | || |||| ||||||||| || || | Sbjct 301961 CTTTCTGGATGTTGTAGTCCGACAAAGTTCGGCCATCTTCCAGCTGCTTGCCAGCAAAGA 302020 Query 34260 TGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCG 34318 | || ||||||||||| || | || |||||||| ||| || ||||| | || Sbjct 302021 TCAGTCGCTGCTGGTCTGGTGGAATGCCTTCCTTGTCTTGGATC-TTGGCTTTCACATTC 302079 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | |||| ||| | | || || |||| || || |||||||| || | ||||| || Sbjct 302080 TCAATCGTATCTGATGCCTCCACTTCCAAAGTAATCGTTTTGCCTGTCAAGGTTTTGACG 302139 Query 34379 AAGATCTGCAT 34389 || |||||||| Sbjct 302140 AATATCTGCAT 302150 >seq623 Length=111817 Score = 87.8 bits (96), Expect = 1e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 34200 CTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAA 34259 |||||||||| |||||||| || || ||| | || ||||||||||| ||||| |||| Sbjct 110330 CTTTCTGTATATTGTAGTCAGAAAGTGTACGACCATCTTCCAACTGCTTTCCTGCAAAAA 110389 Query 34260 TGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCG 34318 | | || || || || || | | |||||||| || ||||||||| | | Sbjct 110390 TTAAACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCCTGAAT-TTTTGCTTTAACGTTT 110448 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | || | || ||| || || | | |||||||| || |||||||| |||||| Sbjct 110449 TCAATGGTGTCAGACGTTTCCACTTCAAGAATAATGGTTTTTCCAGTGAGAGTCTTCACA 110508 Query 34379 AAGATCTGCATC 34390 ||||| |||||| Sbjct 110509 AAGATTTGCATC 110520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 322947332774720