Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zootermopsis_20nevadensis_20[genbank_20GCA_5F000696155.1_202014-06- 05] 31,662 sequences; 485,009,472 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq124 163 2e-35 >seq124 Length=507148 Score = 163 bits (180), Expect = 2e-35 Identities = 241/339 (71%), Gaps = 2/339 (1%) Strand=Plus/Plus Query 20227 GGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGACATGAACACA 20286 |||||||||||||||||||| ||| | |||||||| || |||| | |||||||| || Sbjct 494410 GGTCCTGTGTATGGATTTCAGTGGCGTCATTTTGGGGCCAAATACATGGACATGAATACT 494469 Query 20287 AATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAATTAAAACGAAC 20346 | |||| ||| ||||| || |||||||| || | || || || | | ||| | || Sbjct 494470 GACTATTCTGGTCAAGGTGTTGATCAATTGCAGCAAGTAATCAACACACTGAAATCTAAA 494529 Query 20347 CCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCTTTAATGGCT 20406 ||| | || | | || || | || | ||||| || | ||| | || ||||||| Sbjct 494530 CCATATGATCGTCGCATGATCATGTGTTCATGGAATGCCATTGATATACCAAAAATGGCT 494589 Query 20407 TTGCCTCCATGTCATATGCTATG-CCAATTTTACGTTGCTAATAATGAATTGTCGTGTCA 20465 | || |||||||| ||| || ||||| || |||||| | ||||| ||| || || Sbjct 494590 CTTCCACCATGTCA-CTGCCTTGTTCAATTCTATGTTGCTGAAGATGAACTGTACTGCCA 494648 Query 20466 AATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCAAGTTATGC 20525 ||||||| || || || || ||||| || || || || || || ||||| |||||||| Sbjct 494649 GCTGTATCAGCGTTCAGCAGACATGGGCCTTGGAGTACCATTTAACATTGCTAGTTATGC 494708 Query 20526 GCTGCTTACGTATATGATTGCACATGTTACAGATTTAAA 20564 || | || || ||| ||||| | ||||||| | |||| Sbjct 494709 ATTGTTAACATACATGGTTGCAAAGGTTACAGGTCTAAA 494747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399029962628590