Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zootermopsis_20nevadensis_20[genbank_20GCA_5F000696155.1_202014-06- 05] 31,662 sequences; 485,009,472 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq124 102 2e-16 >seq124 Length=507148 Score = 102 bits (112), Expect = 2e-16 Identities = 210/304 (69%), Gaps = 10/304 (3%) Strand=Plus/Plus Query 35396 GGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGAT--A 35453 ||||| | || || || || ||||| || |||||||||||||| || |||| || | Sbjct 494401 GGAGACCTTGGTCCTGTGTATGGATTTCAGTGGCGTCATTTTGGGGCCAAATAC-ATGGA 494459 Query 35454 CCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACTAAAGACCC 35513 | || | | || ||| |||| | ||| ||||||||||| | || | || || | Sbjct 494460 CATGAA-TACTGACTATTCTGGTCAAGGTGTTGATCAATTGCAGCAAGTAATCAACACAC 494518 Query 35514 TGAGAGAAAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTTC 35573 ||| | || ||| ||||| | | ||||| ||| |||||||| | || ||| | | Sbjct 494519 TGAAATCTAAACCATATGATCGTCGCATGATCATGTGTTCATGGAATGCCATTGATATAC 494578 Query 35574 ACCTTATGGCTCTTCCTCCATGCCACATGAC-TGCTCAATTTTATGTGGCTAATGGAGAA 35632 ||||||||||| ||||| ||| || | || |||||| ||||| ||| | | ||| Sbjct 494579 CAAAAATGGCTCTTCCACCATGTCAC-TGCCTTGTTCAATTCTATGTTGCTGAAGATGAA 494637 Query 35633 TTGTCGTGCCAGTTGTATCAGCG--AAGCGGAGATGTCGGGTTGGGCGTGCCCTTCAATA 35690 ||| |||||| |||||||||| ||| || ||| || | || || || || || | Sbjct 494638 CTGTACTGCCAGCTGTATCAGCGTTCAGCAGACATG--GGCCTTGGAGTACCATTTAACA 494695 Query 35691 TTGC 35694 |||| Sbjct 494696 TTGC 494699 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989182556077210