Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zootermopsis_20nevadensis_20[genbank_20GCA_5F000696155.1_202014-06- 05] 31,662 sequences; 485,009,472 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq513 141 9e-29 >seq513 Length=652068 Score = 141 bits (156), Expect = 9e-29 Identities = 126/158 (80%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 14142 ATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGA 14201 ||||| |||||||| | |||||||||||||| || || | |||||||| ||||||||| Sbjct 207374 ATGTAGGTATCAATCAACAAGCTATACATTTCTGAATGGACATTTTCCATCGCTATCTGA 207433 Query 14202 AAACCATAAAAGCATCTAGCTTCCGACCATTGTACTTCCGAGTAAAATCTTTCGGCCAAA 14261 || ||||| |||||||| ||||| | |||||||||| | ||||| || ||||| Sbjct 207434 AAGCCATAGAAGCATCTTGCTTCTGTTACTTGTACTTCCTGGCTGAATCTCTCTACCAAA 207493 Query 14262 TTTTCATTAACTATACCATCACTAGCTGCAAAAAATGC 14299 || |||||||| || ||||| ||||||||||||||| Sbjct 207494 TTCTCATTAACAATTCCATCTGAAGCTGCAAAAAATGC 207531 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 13894 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13953 |||| |||| ||||||||| || || || | || ||||| | ||| || || | Sbjct 206546 CCTCGTCTCGTGAAATAAGTTCATTGCTGAAGGTGAGACCGGGCATAAGTCCCCGCTTCT 206605 Query 13954 ttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14013 ||||||| || || |||||||| || || ||||| || || || ||||||||||||| Sbjct 206606 TTAACCAGAAGATAGCAGCAAAACTTCCAGAGAAGAAGATACCTTCCACTGCAGCAAACG 206665 Query 14014 CTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAG 14073 | | | || || ||||||| || ||| || || |||||| | ||||| || | Sbjct 206666 CAACCACTCTCTCACCAAACGTCGCAGTTTCGTGCGCTATCCACTGAAGGGCCCAATCTG 206725 Query 14074 AtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATATTCC 14123 || ||||| | | | ||| || |||| || |||||||| || ||| Sbjct 206726 CCTTCTTTTTCACACACGGCATCGTCTCAACGGCGTTAAATAAGTAGTCC 206775 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479538135650800