Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zootermopsis_20nevadensis_20[genbank_20GCA_5F000696155.1_202014-06- 05] 31,662 sequences; 485,009,472 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq513 136 4e-27 >seq513 Length=652068 Score = 136 bits (150), Expect = 4e-27 Identities = 125/158 (79%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 13930 ATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGA 13989 ||||| |||||||| | |||||||||||||| || || | ||||| || ||||||||| Sbjct 207374 ATGTAGGTATCAATCAACAAGCTATACATTTCTGAATGGACATTTTCCATCGCTATCTGA 207433 Query 13990 AAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAG 14049 || ||||| || ||||| ||||||| |||||| ||| | ||||| ||| |||| Sbjct 207434 AAGCCATAGAAGCATCTTGCTTCTGTTACTTGTACTTCCTGGCTGAATCTCTCTACCAAA 207493 Query 14050 TTTTCATTAACAATACCATCACTAGCTGCAAAAAATGC 14087 || ||||||||||| ||||| ||||||||||||||| Sbjct 207494 TTCTCATTAACAATTCCATCTGAAGCTGCAAAAAATGC 207531 Score = 91.5 bits (100), Expect = 1e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 13309 AACTAAAAATCAACATCTAATGAAAAAACATTATCGTCTTTGTTAGAAATAACGCCCATT 13368 || ||||| ||| ||||||||| ||||| |||||| |||||||||| || || || Sbjct 205804 AATTAAAAGTCAGCATCTAATGTAAAAATATTATCTTCTTTGTTAGCCATCACTCCACAC 205863 Query 13369 TTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTT 13428 || || || || | |||| | || ||||||||||| || || ||||| || || || | Sbjct 205864 TTCTGGTACTCTCCAACTTTCTTCTCAAAAAAGTTTGTCTTCCCTTCTAGAGAAATGAGT 205923 Query 13429 TCCATAAAATCGAATGGATT 13448 ||||| || || || || || Sbjct 205924 TCCATGAAGTCAAAAGGGTT 205943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478399386517680