Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zootermopsis_20nevadensis_20[genbank_20GCA_5F000696155.1_202014-06- 05] 31,662 sequences; 485,009,472 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq513 132 4e-26 >seq513 Length=652068 Score = 132 bits (146), Expect = 4e-26 Identities = 147/196 (75%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 13421 ATATAAGTATCTATCAATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGG 13480 || || ||||| ||||| |||||||||||||||||||| | ||||||||||||||| || Sbjct 207374 ATGTAGGTATCAATCAACAAGCTATACATTTCTGAATGGACATTTTCCATCGCTATCTGA 207433 Query 13481 AAACCATAAAAACATCTAGCCTCTGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAG 13540 || ||||| || ||||| || |||| ||| || ||||| | ||||| ||| | || Sbjct 207434 AAGCCATAGAAGCATCTTGCTTCTGTTACTTGTACTTCCTGGCTGAATCTCTCTACCAAA 207493 Query 13541 TTTTCGTTAACTATCCCGTCACTAGCAGCaaaaaaaGCAAGTATGTGCTTAATAAAtttt 13600 || || ||||| || || || ||| |||||||| || |||| || ||||| | | Sbjct 207494 TTCTCATTAACAATTCCATCTGAAGCTGCAAAAAATGCTAGTACATGGGAGATAAAATGT 207553 Query 13601 ttttCGTTTTCTGACA 13616 |||| | ||||| || Sbjct 207554 CTTTCATCTTCTGTCA 207569 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 13202 AATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCC 13261 || || ||||| |||||||| || || || || | ||| || ||||||||||| || Sbjct 206575 AAGGTGAGACCGGGCATAAGTCCCCGCTTCTTTAACCAGAAGATAGCAGCAAAACTTCCA 206634 Query 13262 GaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTT 13321 || || || || ||||| ||||| |||||||| | || || |||||| |||| | || Sbjct 206635 GAGAAGAAGATACCTTCCACTGCAGCAAACGCAACCACTCTCTCACCAAACGTCGCAGTT 206694 Query 13322 TTACTCTCTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCT 13381 | | ||||||||| |||||| | ||| || | ||| || || ||| | || Sbjct 206695 TCGTGCGCTATCCACTGAAGGGCCCAATCTGCCTTCTTTTTCACACACGGCATCGTCTCA 206754 Query 13382 ATTGCGTTAAATAAATA 13398 | ||||||||||| || Sbjct 206755 ACGGCGTTAAATAAGTA 206771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430816092242124