Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zootermopsis_20nevadensis_20[genbank_20GCA_5F000696155.1_202014-06- 05] 31,662 sequences; 485,009,472 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq513 102 9e-17 >seq513 Length=652068 Score = 102 bits (112), Expect = 9e-17 Identities = 123/166 (74%), Gaps = 1/166 (1%) Strand=Plus/Plus Query 21115 AAAAATATT-TATTTAAAAATCAGCATCTAATGAGAAAACATTATCTTCtttttttGACA 21173 || ||| || || |||||| ||||||||||||| |||| |||||||||||| || | || Sbjct 205793 AACAATTTTATAATTAAAAGTCAGCATCTAATGTAAAAATATTATCTTCTTTGTTAGCCA 205852 Query 21174 TAATTCCCATTTTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCA 21233 | | ||| || || || || | |||| | || || ||||| |||||||| ||||| | Sbjct 205853 TCACTCCACACTTCTGGTACTCTCCAACTTTCTTCTCAAAAAAGTTTGTCTTCCCTTCTA 205912 Query 21234 ATGATATAGATTCCATAAAATCAAATGGATTTTCAGATTTAAATAT 21279 || || |||||| || ||||| || || ||||| || || || Sbjct 205913 GAGAAATGAGTTCCATGAAGTCAAAAGGGTTCTCAGAATTGAAAAT 205958 Score = 95.1 bits (104), Expect = 1e-14 Identities = 133/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 21767 CTATACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCC 21826 ||||||||||| ||||| | |||||| |||||||||||||| || || || |||||||| Sbjct 207395 CTATACATTTCTGAATGGACATTTTCCATCGCTATCTGAAAGCCATAGAAGCATCTTGCT 207454 Query 21827 TCTGAACATTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCA 21886 |||| ||| || || |||| | |||| || ||||| || |||||||| Sbjct 207455 TCTGTTACTTGTACTTCCTGGCTGAATCTCTCTACCAAATTCTCATTAACAATTCCATCT 207514 Query 21887 CTGGCGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAATTTT 21946 || ||||||||||| | || || ||||||| || ||| | ||||| | | Sbjct 207515 GAAGCTGCAAAAAATGCTAGTACATGGGAGATAAAATGTCTTTCATCTTCTGTCAGCATG 207574 Query 21947 TTCCAAT 21953 ||||||| Sbjct 207575 TTCCAAT 207581 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531690286960880