Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zootermopsis_20nevadensis_20[genbank_20GCA_5F000696155.1_202014-06- 05] 31,662 sequences; 485,009,472 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq513 129 7e-25 seq95 118 1e-21 seq899 86.0 8e-12 >seq513 Length=652068 Score = 129 bits (142), Expect = 7e-25 Identities = 168/230 (73%), Gaps = 7/230 (3%) Strand=Plus/Plus Query 32683 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 32742 ||||||||| ||| | ||| ||| || ||||| |||||||| || || ||||| | Sbjct 206546 CCTCGTCTCGTGAAATAAGTTCATTGCTGAAGGTGAGACCGGGCATAAGTCCCCGCTTCT 206605 Query 32743 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 32802 | | ||| || || | ||||| |||||| ||||| || ||||| ||||| ||||| | Sbjct 206606 TTAACCAGAAGATAGCAGCAAAACTTCCAGAGAAGAAGATACCTTCCACTGCAGCAAACG 206665 Query 32803 CAATAAGTCTCTCTCCATAACCGGCGCTGT--CATG---TATCCACTTTTGAGCCCAATC 32857 ||| | |||||| ||| | || ||| || | || |||||||| | |||||||| Sbjct 206666 CAACCACTCTCTCACCAAA--CGTCGCAGTTTCGTGCGCTATCCACTGAAGGGCCCAATC 206723 Query 32858 GGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGT 32907 ||||||||||| ||||| ||||| ||||| | || ||||| | |||| Sbjct 206724 TGCCTTCTTTTTCACACACGGCATCGTCTCAACGGCGTTAAATAAGTAGT 206773 Score = 127 bits (140), Expect = 3e-24 Identities = 151/205 (74%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 32931 TATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAAT 32990 || ||||||||||| | ||||||||||| ||||| | ||||| || || || ||||| Sbjct 207377 TAGGTATCAATCAACAAGCTATACATTTCTGAATGGACATTTTCCATCGCTATCTGAAAG 207436 Query 32991 CCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTT 33050 || ||||||||||| || || || | |||||||| | |||| ||| | ||||| Sbjct 207437 CCATAGAAGCATCTTGCTTCTGTTACTTGTACTTCCTGGCTGAATCTCTCTACCAAATTC 207496 Query 33051 TCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTT 33110 ||||| || ||||| || ||||||||||| || | |||||| ||||||| | || Sbjct 207497 TCATTAACAATTCCATCTGAAGCTGCAAAAAATGCTAGTACATGGGAGATAAAATGTCTT 207556 Query 33111 TCGTCTGGTGTTAGTTTATTCCAAT 33135 || ||| ||| || | ||||||| Sbjct 207557 TCATCTTCTGTCAGCATGTTCCAAT 207581 Score = 95.1 bits (104), Expect = 2e-14 Identities = 79/97 (81%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 33147 TTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTC 33206 || |||| ||||||||||||| | |||||||| || || |||||||| || ||||| | | Sbjct 207894 TTGGATAAATCCACTTCTTCCGCAGTCCAAAACGAAGCTTCTGCCTTCTTGTACATTTGC 207953 Query 33207 CAGATGTCATGATATTGAATTGGAAAAATAACAAATC 33243 || ||||| |||||||| || || || || ||||||| Sbjct 207954 CATATGTCGTGATATTGGATGGGGAAGATTACAAATC 207990 >seq95 Length=16868 Score = 118 bits (130), Expect = 1e-21 Identities = 167/227 (74%), Gaps = 6/227 (3%) Strand=Plus/Plus Query 62981 GTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCA-GTCCAGGACATTCATCCGG 63039 |||||||| || |||| ||| ||||| || | | | |||||||||| ||| ||| Sbjct 6552 GTATACAAGTCATCAAACTTGTCACCCCAG-CAGTCTGAAAGTCCAGGACAAGCATGCGG 6610 Query 63040 ACACATCAACGACCAC-TCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCC 63098 |||||||| |||| ||| ||| | ||||||||| |||||||| ||||||||||||| Sbjct 6611 ACACATCAGACTCCACATCT-CGTTGTTCTTCACTCGCTTCATAAATAGATCAGGAATCC 6669 Query 63099 AAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 63157 | ||||| ||| || ||||| | | || | |||||| || || || || || || || Sbjct 6670 ACAGAGC-ATAGAAAAGATCCCGAGCTCGAATTTCCTCTTTCCCCGTGTTTTTCTTCAGG 6728 Query 63158 TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGC 63204 || || ||| | | | ||| | |||||| ||||||| || ||||| Sbjct 6729 TCAAGAAACTCAAACACATCTGCATGCCAGGGTTCCAGATAAATGGC 6775 Score = 95.1 bits (104), Expect = 2e-14 Identities = 124/172 (72%), Gaps = 0/172 (0%) Strand=Plus/Plus Query 61916 CTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATA 61975 |||||| |||| || |||||| ||| | ||| || |||| || || ||||| || Sbjct 2507 CTCCATGCGTAGAAGTGCATAGACGTCAATTTTCCGTAGTTCGGTTCGGCAATATGAATG 2566 Query 61976 TTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTC 62035 |||| || || || || || ||||| || || | ||| ||||||||||| || || || Sbjct 2567 TTCAGGGACTGGCTCTGGTCAATGAACGCACCTCGGTCAGCAGCCATTTTGATTATAGTT 2626 Query 62036 TTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 62087 || || || |||||||| | ||||| || | ||||||||| || |||| Sbjct 2627 TTCTGCGGGATTTCCCACACCGTTTTGTAGAGGGCCTTAATATCATCCGGAA 2678 Score = 93.3 bits (102), Expect = 5e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 63221 TTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATA 63280 || || || || || || | |||| || ||||| ||||||||||||||||| || | | Sbjct 7354 TTATTGCCACCTTGGTCCACATATCGTGCTGTGTTGTTATAAACTCTCAACATAGGCACA 7413 Query 63281 ATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTA 63340 || ||||| || || |||||||| || | ||||| || | || || |||||| Sbjct 7414 ATGCCATTCGAAGTGCCATTGGTGCCAGCTATATACGAGCCTGTAGCGCGGATATTATGG 7473 Query 63341 ATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCA 63400 || || || ||||| || || ||||| || | ||| ||| |||| | || ||| Sbjct 7474 ATGTGGAGTCCGATTCCACCAGCAGACTTAGAAATCAGTGCACATTGTTTCAGTGTGTCA 7533 Query 63401 TAGATGCCCTCTATACTATCATCCATCAT 63429 || || ||||| || || || ||| |||| Sbjct 7534 TAAATTCCCTCAATGCTGTCGTCCTTCAT 7562 Score = 93.3 bits (102), Expect = 5e-14 Identities = 106/140 (76%), Gaps = 2/140 (1%) Strand=Plus/Plus Query 63810 CACTAAATAGtttttttG-TTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGA 63868 ||||||| ||| |||||| |||| || |||||||| || ||||| ||||| || || ||| Sbjct 10573 CACTAAA-AGTCTTTTTGGTTTCCTTATGTAGATTGGAGACGGCAATTCTGGCTGCAAGA 10631 Query 63869 ATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCC 63928 || || ||||||||||| | || || || || || | || || ||||| | ||| Sbjct 10632 ATCGCGTAATCCGGATGCTTGGTTGTCATGGTAGCAGCAGTCTCAGCGGCCAGGTTATCC 10691 Query 63929 AATTCTACCGTTGTTACACC 63948 | ||| || ||||||||||| Sbjct 10692 AGTTCCACTGTTGTTACACC 10711 Score = 89.7 bits (98), Expect = 7e-13 Identities = 124/171 (73%), Gaps = 2/171 (1%) Strand=Plus/Plus Query 62426 CCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCA 62485 ||| | || || || ||||| || ||||| || ||||||||||| ||||| || || Sbjct 4429 CCTTCGTAAGTCTCATATGGGCCCCGTTTCTCGGCAAGTTCACAACTTGCCTCCAAAGCC 4488 Query 62486 CCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAAT 62545 ||||| ||||| || || || |||| || |||||| | || || || || |||||| Sbjct 4489 CCGTAGTAAATAGTCTCAAATATCTGCTGATTTAGCTTCTGTGCCTCTTCACTGTCAAAT 4548 Query 62546 GGATAAT-TTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACC 62595 || |||| | ||| || ||||| ||||| || ||||| | ||||| || Sbjct 4549 GG-TAATCTCAAGCAGATGAACGCATCTGCCAAACCTTGTATGCCAATGCC 4598 Score = 82.4 bits (90), Expect = 1e-10 Identities = 84/110 (76%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 62192 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 62251 || ||||| ||||| |||| || | | |||||| ||||| | ||||||||||| | Sbjct 3753 ACCTGAAACTCTCCGGACAGCACACGTCTAGTGTAGATATTTGTTGTATACGGTTCAAAT 3812 Query 62252 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGC 62301 ||||| || ||||| | |||||||| ||||| || |||||||| || || Sbjct 3813 GACTCGTTGTTTCCAAGGATTTGAGCCGTTGAAGCTGTCGGCATTGGCGC 3862 >seq899 Length=978777 Score = 86.0 bits (94), Expect = 8e-12 Identities = 109/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 80844 GCAAACGAAGGAAAAATAGTTATAGTAGCCGCACTCGATGGTACATTTCAACGTAAACCG 80903 |||||| || || ||||| || |||| ||||| |||||||||||||| || | Sbjct 355906 GCAAACCTTGGTAAGATAGTGATTATAGCAGCACTTGATGGTACATTTCAGCGAGTTGGG 355847 Query 80904 TTTAATAATATCTTGGATCTTATTCCATTATCTGAAATGGTGGTAAAACTAACTGCAGTG 80963 ||| || || ||| | |||||||| || |||||| ||||| ||||| | ||| || Sbjct 355846 TTTGGGAACATTTTGAACCTTATTCCTTTGGCTGAAAATGTGGTGAAACTTAATGCTGTC 355787 Query 80964 TGTATGAAATGCTTTAAGGAGGCTTCCTTT 80993 || |||| |||||| | || ||||| ||| Sbjct 355786 TGCATGATATGCTTCAGAGAAGCTTCTTTT 355757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633381224295200