Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zootermopsis_20nevadensis_20[genbank_20GCA_5F000696155.1_202014-06- 05] 31,662 sequences; 485,009,472 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq513 89.7 1e-12 >seq513 Length=652068 Score = 89.7 bits (98), Expect = 1e-12 Identities = 146/209 (70%), Gaps = 6/209 (3%) Strand=Plus/Minus Query 42612 TTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGG 42671 || || ||| | ||||||||||| || | || |||||||| || ||||| || | ||| Sbjct 206765 TTTAACGCCGTTGAGACGATGCCGTGTGTGAAAAAGAAGGCAGATTGGGCCCTTCAGTGG 206706 Query 42672 ATCGAGAGTCCCGAC---GCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAG 42728 || | | | ||| || ||||| || ||||| |||| || ||| | || || || Sbjct 206705 ATAGCG---CACGAAACTGCGACGTTTGGTGAGAGAGTGGTTGCGTTTGCTGCAGTGGAA 206649 Query 42729 GGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTCGATG 42788 || ||||||||||| || || || | ||||||||| | ||| || || ||| Sbjct 206648 GGTATCTTCTTCTCTGGAAGTTTTGCTGCTATCTTCTGGTTAAAGAAGCGGGGACTTATG 206589 Query 42789 CCCGGACTCACCTTCTCGAACGAACTCAT 42817 ||||| ||||||||| || ||||| || Sbjct 206588 CCCGGTCTCACCTTCAGCAATGAACTTAT 206560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 943965454153120