Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zootermopsis_20nevadensis_20[genbank_20GCA_5F000696155.1_202014-06- 05] 31,662 sequences; 485,009,472 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq124 131 1e-25 >seq124 Length=507148 Score = 131 bits (144), Expect = 1e-25 Identities = 230/335 (69%), Gaps = 0/335 (0%) Strand=Plus/Minus Query 20237 AGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGA 20296 ||||| ||||| | |||| ||| || ||||| | | ||| || ||||||||||| || Sbjct 494744 AGACCTGTAACCTTTGCAACCATGTATGTTAACAATGCATAACTAGCAATGTTAAATGGT 494685 Query 20297 ACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCT 20356 ||||| | ||||||||| | || | |||||||||||| ||| | || ||| | ||||| Sbjct 494684 ACTCCAAGGCCCATGTCTGCTGAACGCTGATACAGCTGGCAGTACAGTTCATCTTCAGCA 494625 Query 20357 ACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGG 20416 ||||| |||||| | ||||||| || ||||| ||||| | | || | Sbjct 494624 ACATAGAATTGAACAAGGCAGTGACATGGTGGAAGAGCCATTTTTGGTATATCAATGGCA 494565 Query 20417 TTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATG 20476 ||||| | |||||| || || | | ||| | || ||| ||| | | | | | Sbjct 494564 TTCCATGAACACATGATCATGCGACGATCATATGGTTTAGATTTCAGTGTGTTGATTACT 494505 Query 20477 TACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCC 20536 | | |||||| |||| || || || | |||||||| || | ||||| ||| ||| Sbjct 494504 TGCTGCAATTGATCAACACCTTGACCAGAATAGTCAGTATTCATGTCCATGTATTTGGCC 494445 Query 20537 CCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCC 20571 ||||| || | |||||| || || || ||||| || Sbjct 494444 CCAAAATGACGCCACTGAAATCCATACACAGGACC 494410 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441198115680080