Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zootermopsis_20nevadensis_20[genbank_20GCA_5F000696155.1_202014-06- 05] 31,662 sequences; 485,009,472 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq950 158 1e-33 seq1183 122 9e-23 seq623 109 5e-19 seq70 95.1 1e-14 seq1068 93.3 4e-14 seq583 89.7 5e-13 seq95 84.2 2e-11 >seq950 Length=836093 Score = 158 bits (174), Expect = 1e-33 Identities = 166/216 (77%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 64229 CTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCG 64288 || || || ||||||| || ||||| || || || || ||||| | || ||| || | Sbjct 302164 CTGAGGACGAGATGAAGTGTAGATTCCTTCTGGATATTATAATCAGAGAGGGTTCGGCCA 302223 Query 64289 TCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTT 64348 || || ||||||||||| ||| | || || ||||||||||| || ||||||||||| || Sbjct 302224 TCCTCCAGCTGCTTGCCAGCAAAGATCAGTCGCTGCTGGTCTGGTGGAATTCCTTCCTTG 302283 Query 64349 TCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTAC 64407 ||||| | | || ||||| ||| ||| | |||||| || |||||||||| ||| | Sbjct 302284 TCTTGGA-TCTTGGCTTTCACATTCTCAATCGTATCAGATGCTTCCACTTCTAAAGTAAT 302342 Query 64408 GGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||||||| |||| |||||| |||||||| ||||| Sbjct 302343 GGTCTTGCCAGTCAGAGTTTTCACGAAAATCTGCAT 302378 Score = 127 bits (140), Expect = 2e-24 Identities = 158/214 (74%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 |||||| || || | || || ||||| || || || ||||||| || ||| || | || Sbjct 297493 AAGCACAAGGTGGAGTGTAGACTCTTTCTGGATATTATAATCTGAGAGGGTTCGGCCATC 297552 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 || ||||||||||| ||| | || || ||||||||||| || ||||| |||||||| || Sbjct 297553 CTCCAGCTGCTTGCCAGCAAAGATCAGTCGCTGCTGGTCTGGTGGAATGCCTTCTTTGTC 297612 Query 64351 TTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGG 64409 || | | || ||||| || ||| | ||||||| || || ||||| | ||| | || Sbjct 297613 CTGGA-TCTTGGCTTTCACGTTCTCAATTGTATCAGAAGCCTCTACTTCCAGAGTAATGG 297671 Query 64410 TCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 | || || ||||| ||||| || || || ||||| Sbjct 297672 TTTTTCCTGTCAAGGTTTTGACAAATATCTGCAT 297705 Score = 116 bits (128), Expect = 4e-21 Identities = 142/191 (74%), Gaps = 2/191 (1%) Strand=Plus/Plus Query 64254 CTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAA 64313 |||| || |||||||| || | | || || | ||||| ||||||||||| ||| | | Sbjct 301961 CTTTCTGGATGTTGTAGTCCGACAAAGTTCGGCCATCTTCCAGCTGCTTGCCAGCAAAGA 302020 Query 64314 TGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACC 64372 | || ||||||||||| || ||||| ||||| || ||||| | | || ||||| ||| | Sbjct 302021 TCAGTCGCTGCTGGTCTGGTGGAATGCCTTCCTTGTCTTGGA-TCTTGGCTTTCACATTC 302079 Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432 || | ||||| || |||||||| | ||| | || ||||| ||||| ||||| ||| Sbjct 302080 TCAATCGTATCTGATGCCTCCACTTCCAAAGTAATCGTTTTGCCTGTCAAGGTTTTGACG 302139 Query 64433 AAAATTTGCAT 64443 || || ||||| Sbjct 302140 AATATCTGCAT 302150 Score = 111 bits (122), Expect = 2e-19 Identities = 153/211 (73%), Gaps = 5/211 (2%) Strand=Plus/Plus Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294 || ||||| | || |||||||| || |||||||||| | ||||| | || || Sbjct 300667 ACCAGATGGAGTGTTGATTCTTTCTGGTTGTTGTAATCC---AGTGTGCGTCCATCCTCC 300723 Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354 ||||||||||| ||| | || || ||||| || || || |||||||||||||| || || Sbjct 300724 AGCTGCTTGCCAGCAAAGATCAGTCGCTGTTGATCAGGTGGAATTCCTTCTTTGTCCTG- 300782 Query 64355 ATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTT 64413 | | || ||||| ||| ||| | |||||| || || ||||| | || | ||||| Sbjct 300783 AATCTTGGCTTTAACATTCTCAATCGTATCAGAAGCCTCTACTTCCAATGTGATTGTCTT 300842 Query 64414 GCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 ||| |||| ||| || || || || |||||| Sbjct 300843 GCCTGTCAGAGTCTTAACAAAGATCTGCATT 300873 Score = 93.3 bits (102), Expect = 4e-14 Identities = 99/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 64229 CTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCG 64288 || || || || |||| || ||||| || || || || ||||||| || ||| || | Sbjct 297719 CTGAGGACGAGGTGAAGTGTAGATTCCTTCTGGATATTATAATCTGAGAGGGTTCGGCCA 297778 Query 64289 TCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTT 64348 || || ||||| ||||| ||| | || || ||||||||||| || |||||||||||||| Sbjct 297779 TCCTCCAGCTGTTTGCCAGCAAAGATCAGTCGCTGCTGGTCTGGTGGAATTCCTTCTTTG 297838 Query 64349 TCTTGTATTTT 64359 || || || || Sbjct 297839 TCCTGGATCTT 297849 Score = 84.2 bits (92), Expect = 2e-11 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 |||||| || || | || || ||||| || |||||||| |||| | || || | || Sbjct 298986 AAGCACAAGGTGGAGTGTAGACTCTTTCTGGATGTTGTAGTCTGACAAAGTTCGGCCATC 299045 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 || ||||||||||| ||| | || || ||||||||||| || ||||| ||||| || || Sbjct 299046 CTCCAGCTGCTTGCCAGCAAAGATCAGTCGCTGCTGGTCTGGTGGAATGCCTTCCTTGTC 299105 Query 64351 TTGTATTTT 64359 || || || Sbjct 299106 CTGGATCTT 299114 >seq1183 Length=31732 Score = 122 bits (134), Expect = 9e-23 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || |||||||| || ||||||||||||| | |||||| | ||||| | |||||||| Sbjct 15683 GTGGATTCTTTCTGGATGTTGTAATCTGATAAGGTGCGGCCATCTTCCAATTGCTTGCCA 15742 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || || |||||||| || || || || ||||| || || || | |||| |||| Sbjct 15743 GCAAAGATAAGTCGCTGCTGCTCAGGGGGGATACCTTCCTTGTCCTGCAGCTTTTTCTTT 15802 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 | | ||| | |||||| | | || || || | ||| | |||||| || |||| || Sbjct 15803 AGATTCTCAATGGTATCAGCTGGCTCTACCTCCAGAGTGATGGTCTTCCCTGTCAGGGTC 15862 Query 64427 TTTACGAAAATTTGCAT 64443 || |||||||| ||||| Sbjct 15863 TTCACGAAAATCTGCAT 15879 Score = 113 bits (124), Expect = 5e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || ||| |||| || ||||||||||||| | |||||| | ||||| | |||||||| Sbjct 15455 GTTGATCCTTTCTGGATGTTGTAATCTGATAAGGTGCGGCCATCTTCCAATTGCTTGCCA 15514 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || || |||||||| || || || || ||||| || || || | |||| |||| Sbjct 15515 GCAAACATAAGTCGCTGCTGCTCAGGGGGGATACCTTCCTTGTCCTGCAGCTTTTTCTTT 15574 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 | | ||| | |||||| | | || || || | ||| | |||||| || |||| || Sbjct 15575 AGATTCTCAATGGTATCAGCTGGCTCTACCTCCAGAGTGATGGTCTTCCCTGTCAGGGTC 15634 Query 64427 TTTACGAAAATTTGCAT 64443 || || ||||| ||||| Sbjct 15635 TTCACAAAAATCTGCAT 15651 >seq623 Length=111817 Score = 109 bits (120), Expect = 5e-19 Identities = 154/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || | ||| | || |||||||| || ||||||||||||| | ||| || | || Sbjct 107662 AAGAACCAAATGCAGGGTTGATTCTTTCTGGATGTTGTAATCTGATAAGGTACGGCCATC 107721 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 || | |||||||| ||| | || || ||||||||| | ||||| || ||||| || || Sbjct 107722 CTCCAATTGCTTGCCAGCAAAGATAAGTCGCTGCTGGCCAGGAGGGATACCTTCCTTGTC 107781 Query 64351 TTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGG 64409 || | | |||||||| || ||| | |||||| | | || || || | ||| | || Sbjct 107782 CTGGA-TCTTTGCTTTCACGTTCTCAATGGTATCAGCTGGCTCTACCTCCAGAGTGATGG 107840 Query 64410 TCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||| || |||| || || || ||||| ||||| Sbjct 107841 TCTTCCCTGTCAGGGTCTTCACAAAAATCTGCAT 107874 >seq70 Length=429657 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || |||||||| || ||||||||||||| | |||||| | || || | |||||||| Sbjct 142546 GTTGATTCTTTATGGATGTTGTAATCTGATAAGGTGCGGCCATCCTCCAATTGCTTGCCA 142487 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| |||| | || || || | |||||||||||||| || || || |||||| | || Sbjct 142486 GCAAAAATTAAACGTTGTTGATGAGGAGGAATTCCTTCCTTGTCCTGAATTTTTCGTTTC 142427 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 | || || || ||| | || ||||| | ||| | ||| || || || | ||| Sbjct 142426 AAGTTTTCAACGGTGTCAGATGGTTCAACTTCAAGAGTAATGGTTTTTCCAGTGAGAGTC 142367 Query 64427 TTTACGAAAATTTGCAT 64443 || || || | |||||| Sbjct 142366 TTCACAAAGACTTGCAT 142350 >seq1068 Length=143541 Score = 93.3 bits (102), Expect = 4e-14 Identities = 138/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || |||| ||| || ||||||||||||| | ||||| | || || | |||||||| Sbjct 133803 GTTGATTATTTCTGGATGTTGTAATCTGATAAAGTGCGGCCATCCTCCAATTGCTTGCCA 133862 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | | || |||| |||||| || || || ||||| ||||| || | ||| |||| Sbjct 133863 GCAAAGACAAGTCGCTACTGGTCAGGGGGGATACCTTCCTTTTCCTGGAGCTTTGCCTTT 133922 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| ||| | |||| | | || || || | ||| | |||||| || |||| || Sbjct 133923 ACATTCTCAATGGTATTAGCTTGCTCTACCTCCAGAGTGATGGTCTTCCCTGTCAGGGTC 133982 Query 64427 TTTACGAAAATTTGCA 64442 || || ||||| |||| Sbjct 133983 TTCACAAAAATCTGCA 133998 >seq583 Length=527131 Score = 89.7 bits (98), Expect = 5e-13 Identities = 133/189 (70%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 64256 TTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATG 64315 || ||||| || ||||| | | ||||| | ||||| | ||||| || ||| | || Sbjct 233046 TTCTGAATATTATAATCCGACAACGTGCGACCATCTTCTAATTGCTTCCCAGCAAAGATC 232987 Query 64316 AGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCC 64375 | ||||| ||||| || || || |||||||| ||||| || || ||| ||| || Sbjct 232986 AATCGCTGTTGGTCCGGTGGGATACCTTCTTTATCTTGAATCTTAGCCTTGACATTTTCT 232927 Query 64376 ACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAA 64435 | ||||| || || ||||| | |||| || || || || | |||||||||||| Sbjct 232926 ATGGTATCCGACGCCTCAACTTCGAGGGTTATAGTTTTACCCGTTAGGGTTTTTACGAAA 232867 Query 64436 ATTTGCATT 64444 ||||||||| Sbjct 232866 ATTTGCATT 232858 >seq95 Length=16868 Score = 84.2 bits (92), Expect = 2e-11 Identities = 98/129 (76%), Gaps = 4/129 (3%) Strand=Plus/Plus Query 153813 GACTGGCTCTGATCGATGAAAGCGCCGCGATCGGCCGCCATGTCAATCA-AGTTTTTACT 153871 ||||||||||| || ||||| || || || || || ||||| | || | |||||| || Sbjct 2573 GACTGGCTCTGGTCAATGAACGCACCTCGGTCAGCAGCCATTTTGATTATAGTTTT--CT 2630 Query 153872 GCTC-ATTTCCCACACAGTTTTGTAGACGGCTTTAATGTCGTCGGGTATGCGATCAATTT 153930 || ||||||||||| |||||||||| ||| ||||| || || || || | |||||| | Sbjct 2631 GCGGGATTTCCCACACCGTTTTGTAGAGGGCCTTAATATCATCCGGAATTCCATCAATAT 2690 Query 153931 TCTGCACAC 153939 || |||| Sbjct 2691 CCTAAACAC 2699 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499447053079280