Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zootermopsis_20nevadensis_20[genbank_20GCA_5F000696155.1_202014-06- 05] 31,662 sequences; 485,009,472 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq1127 298 4e-75 seq75 134 1e-25 seq1259 109 4e-18 seq190 100 2e-15 seq85 100 2e-15 seq1175 87.8 1e-11 >seq1127 Length=1068992 Score = 298 bits (330), Expect = 4e-75 Identities = 957/1469 (65%), Gaps = 27/1469 (2%) Strand=Plus/Plus Query 517259 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 517318 |||| |||||| | ||||||||||||||| | | |||||||| || | | || || Sbjct 1036120 GCAGACACATTCACAATACCATTGGCATCAATGTTGAATGTGACCTCTACCTTTGGCACA 1036179 Query 517319 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTA 517378 || | | || || || || ||| | ||| || ||||| || ||| || ||| | Sbjct 1036180 CCACGAGGTGCTGGAGGAATGCCTGTGAGATTGAAAGTTCCTAGGAGATTGTTGTCTCGA 1036239 Query 517379 GTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAA 517438 || | | ||| || || ||||| | || || || || ||| ||||| || ||||| Sbjct 1036240 GTCATTGCTCGCTCGCCTTCGAACACCTGTATGGTGACAGCAGGCTGATTGTCAGAATAC 1036299 Query 517439 GTTGTAAATACTCTG-GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGT 517497 ||||| || |||| | | | | ||||| || | ||| | || || ||||| || Sbjct 1036300 GTTGTGAA-GGTCTGCGTCTGTCTGCAAGGGATGCGAGAGTTACGTTCGATGATATTCGT 1036358 Query 517498 CATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAAT 517557 ||||| ||||| ||||| || | |||||| ||||| || || ||||| || | | || Sbjct 1036359 CATAACTCCACCAGCTGTCTCGATACCAAGGGAAAGCGGCGTCACATCCACCAATAGAAC 1036418 Query 517558 ATTTTGAAGTTTTTCATC-AGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCAT 517616 || ||| | | | | | | || | ||| |||||||| ||||| | ||| || |||| Sbjct 1036419 ATCTTGGA-TCTGTGAGCTGGTGTCTCCACTCAGAATAGCAGCTTGCACAGCTGCCCCAT 1036477 Query 517617 ATGCAACAGCTTCATCAG----GATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAA 517672 |||| ||||| ||||||| ||| |||| ||| || | ||| ||| ||| | Sbjct 1036478 ATGCGACAGCCTCATCAGGGTTGATGGACAGGTTC----AGCTGTTTCCCACAGAAGTAG 1036533 Query 517673 TTTGAAAGAAGTTGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTC 517731 || ||| || | ||| | ||| ||||| |||| ||| || || |||| || | || Sbjct 1036534 TTCTGAAGCAGAT-TCTGGATCTTTGGAATTCGAGTTGAGCCACCCACTAGCACCACGTC 1036592 Query 517732 ATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACC 517791 ||| | | || || || |||| ||| | ||||||| || || | || Sbjct 1036593 ATGTATCGACCCCTTGTCAAGCTTTGCATCTGTCAGTGCTTTTTCTACAGGGTGCAGTGT 1036652 Query 517792 CGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGAC--ATTA 517849 || | || | || | ||||||||| || || ||||| | ||| | | || Sbjct 1036653 CGAACGGAAAAGATCAGCACAAAGTTCCTCAAACCGTGCTCT--TGAGACTTTCGAATAG 1036710 Query 517850 TAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGT 517909 |||| || || || | ||| | ||||| |||||| | | | || ||||| || Sbjct 1036711 AAATCGATACCATCAACCAAGGCATCAATTTCAATGCTTGCCTCTGTACTGGAAGAAAGG 1036770 Query 517910 GCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATT--GAT 517967 | || || || | ||| |||||| || |||| ||| || ||| ||| |||| | Sbjct 1036771 GTTCGCTTTGCTCTCTCAGCTGCTGTTCTGAGTCGTCGCAATGCTCTTG--GATTCCCAC 1036828 Query 517968 TCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTAT 518027 | ||| | || | || |||||||| || ||| | | |||| || || |||| Sbjct 1036829 GTATGTCTTTCTTGAACTTCCTCTTGAACTCATCAGCCAAGTGGCTTACCAGTCGGTTAT 1036888 Query 518028 CAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAG---TC 518084 |||| |||||||| || | | |||| ||||| || || || || | ||||| || Sbjct 1036889 CAAAGTCTTCACCACCAAGGTGGGTATCTCCTGCAGTTGCCCTAACCTCAAAAAGTGATC 1036948 Query 518085 CATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTA 518144 | || |||| || | | | |||||| ||| || || |||| ||||| || |||| Sbjct 1036949 CTTCATCAATAGTAAGGATGGAGACATCAAAGGTACCGCCTCCCAGGTCAAAGATGAGTA 1037008 Query 518145 CATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTT 518204 |||| |||| | |||| || || || ||||| || | |||||| || || || | Sbjct 1037009 CATTACGTTCTCCCTTGAGGTTCTTGTCTAGCCCATAGGCCAGAGCAGCGGCTGTGGGCT 1037068 Query 518205 CATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTC 518264 |||| || || | | || || | || || || | || || ||||| || ||||| | Sbjct 1037069 CATTGATGATGCGGAGCACGTTGATGCCTGCGATGGTACCCGCGTCTTTTGTAGCTTGAC 1037128 Query 518265 TTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAA 518324 ||||| || || || || || || || || || || || || |||| ||||| | Sbjct 1037129 GCTGTGAGTCATTGAAGTACGCTGGCACCGTGATTACAGCGTCGCGTACTGTGTTACCCA 1037188 Query 518325 TATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGG-G 518383 |||| |||||| | | ||| ||| | | | ||| || || | |||||| | Sbjct 1037189 GGAAAGCCTCTGCCGTCTCTCTCAACTTAGTCAGTACCATGGAGCTGATCTCTTCTGGTG 1037248 Query 518384 GAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTA 518443 || |||| | | |||| | |||| ||| | | | || || | |||| Sbjct 1037249 CAAACTTGCGT-GTTTCACCCTTATATTGTACCTGGATTTTAGGCTTCCCGCAGTCATTT 1037307 Query 518444 ATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTA 518503 | ||| |||| ||||| | ||||| || ||||| ||| || | ||| |||| Sbjct 1037308 ACCACTGTAAAAGGCCAATGCTTCATGTCACTTTGAATCTTTTCATCGTCAAAGCGTCTA 1037367 Query 518504 CCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTG 518563 || || | ||||| ||||| || | ||||| | ||||| || || | || | ||| Sbjct 1037368 CCGATCAGCCGTTTCGCATCGAAGACTGTATTTTTGGGATTCATAGCCACCTGGTTTTTA 1037427 Query 518564 GCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGA 518623 || || |||||||| ||| |||| | | | || | ||||| ||||| |||||| Sbjct 1037428 GCGGCGTCTCCAATAAGACGTTCGGAGTAGTTGAAAGCCACATAGCTGGGAGTAGTGCGA 1037487 Query 518624 TTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTA 518683 || |||||||| || ||||| || || || || || | |||||| ||||| || ||| | Sbjct 1037488 TTTCCTTGATCGTTTGCAATGATCTCGACCTTGCCTTGTTGCCAGACACCAACGCAAGAA 1037547 Query 518684 AAAGTTGTTCCTAAATCAATACCAATAGC 518712 | || ||||| | ||||| || ||||| Sbjct 1037548 TACGTGGTTCCAAGGTCAATTCCGATAGC 1037576 >seq75 Length=3442531 Score = 134 bits (148), Expect = 1e-25 Identities = 158/213 (74%), Gaps = 3/213 (1%) Strand=Plus/Minus Query 518101 AAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTC 518160 ||||| |||||| || |||||||||| |||||| | || |||||| |||| | | Sbjct 2938933 AAGAGAGACATCAAATGTGCCACCACCCAAATCAAACACCAGAACATTCTTTTC---GCC 2938877 Query 518161 TTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAA 518220 || | || || | |||||| |||| || ||||| |||||||||||||| ||||||| Sbjct 2938876 TTCCCTCTTGTCCAAACCATAAGCAATGGCTGCAGCCGTTGGTTCATTAATGATTCTCAT 2938817 Query 518221 AACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAA 518280 ||| ||| |||| ||| | || ||||| ||||| ||||||| || | ||| || || Sbjct 2938816 AACTACAAGTCCAGAGATTGTACCAGCATCCTTAGTTGCTTGTCGCTGAGCATCATTGAA 2938757 Query 518281 ATATGCAGGAACAGTAATAACGGCATCAGTTAC 518313 ||| ||||| || || | || |||| |||||| Sbjct 2938756 ATAAGCAGGTACTGTCACCACAGCATGAGTTAC 2938724 Score = 91.5 bits (100), Expect = 1e-12 Identities = 131/184 (71%), Gaps = 3/184 (2%) Strand=Plus/Minus Query 518498 TCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGA 518557 ||||| ||||| | ||||| |||||||| | ||| || |||||| || | ||| Sbjct 2937770 TCTCTGCCAATAAGACGTTTGGCATCAAACACAGTGTTTTCTGGATTTGCTGTAAGTTGG 2937711 Query 518558 TATTTGGCTGCATCTCCAATCAGATGTTCTGTCTC---TGTAAATGAAACATATGATGGA 518614 | |||||| ||||||||||||| || || ||| |||| |||||||| ||| Sbjct 2937710 TTTTTGGCAGCATCTCCAATCAACCTCTCACCTTCAGGTGTGAATGCCACATATGAAGGA 2937651 Query 518615 GTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCT 518674 || | | ||| || |||||||| ||||||||||| || |||||| | | ||||| Sbjct 2937650 GTAATTCTATTTCCCTGATCATTTGCAATAATTTCCACACGACCATTCTTATAGACACCA 2937591 Query 518675 ACAC 518678 |||| Sbjct 2937590 ACAC 2937587 >seq1259 Length=610742 Score = 109 bits (120), Expect = 4e-18 Identities = 116/153 (76%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 518560 TTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGT 518619 |||||| ||||| ||||| | |||| || || ||||| | ||||| ||| ||||| Sbjct 99819 TTTGGCAGCATCGCCAATTAATCGTTCCGTATCAGTAAAGGCCACATAACTTGGCGTTGT 99878 Query 518620 GCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACA 518679 ||||| ||||||||||| ||||||||||| ||||| |||| ||||||||| || ||||| Sbjct 99879 CCGATTCCCTTGATCATTTGCAATAATTTCCACTTTTCCATGTTGCCATACTCCGACACA 99938 Query 518680 ACTAAAAGTTGTTCCTAAATCAATACCAATAGC 518712 | || ||||| | ||| || || | ||| Sbjct 99939 GGAGTACGTAGTTCCAAGATCTATTCCTACAGC 99971 Score = 89.7 bits (98), Expect = 4e-12 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 517258 GGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGAC 517317 ||||| ||||| ||||| || || || ||||||||||| ||||| || |||| || || Sbjct 86437 GGCAGAAACATTCAGAATTCCGTTAGCGTCCAAATCAAAAGTGACCTCTATTTTTGGAAC 86496 Query 517318 CCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTT 517377 ||||| |||| || || || || ||||| || ||||||| |||||||||| Sbjct 86497 GCCTCTTGGAGCTGGAGGTATTCCAGTTAAATTGAAAGTTCCCAATAAATTATTATCTGC 86556 Query 517378 AGTGAATTTTCGTTCACCCTCGAA 517401 ||| | | ||||||||| || || Sbjct 86557 AGTCATTGCTCGTTCACCTTCAAA 86580 >seq190 Length=1375728 Score = 100 bits (110), Expect = 2e-15 Identities = 97/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 635441 TGTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGTCTTAAT 635500 ||||| |||| | || || ||||| ||||| ||||| | ||| ||||||||||| | Sbjct 355975 TGTACATTAATCCTCACTGAAGGAGACTCAGCCAAAACGCTGGCTGTGTCTGGTCTTGGT 356034 Query 635501 GTTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTAGG 635560 || |||| ||||| | |||||||| ||||||||| | || ||| | |||||||||||| Sbjct 356035 GTAGTTGGGAGAGACAAATATGGAGTGTTCCCACTTCGTGGTAAATTGTTGAATGTTAGG 356094 Query 635561 GATGC 635565 || || Sbjct 356095 GAGGC 356099 >seq85 Length=1587032 Score = 100 bits (110), Expect = 2e-15 Identities = 281/429 (66%), Gaps = 2/429 (0%) Strand=Plus/Minus Query 517244 GTTGATTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACT 517303 || || || || |||| || || || |||||||| || ||||| | ||| || || || Sbjct 1421720 GTCGACTTCTCTACGGCCGTTACGTTCAGAATACCGTTAGCATCGATATCGAAAGTCACC 1421661 Query 517304 TCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGA 517363 ||||| |||||||| |||| | | || || || || || | | ||| |||| || Sbjct 1421660 TCAATCTGAGGGACACCTCGCGGTGCGGGAGGAATTCCGGTGAGTTCAAACTTTCCGAGC 1421601 Query 517364 TTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTT 517423 || ||||| || || | |||||| |||||| | | ||||| || | | Sbjct 1421600 AGGTTGTTATCCTTGGTCATGGCTCGTTCGCCCTCGTATACCTGGATCAACACACCTGGC 1421541 Query 517424 TGATTATCTGAATAAGTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCT 517482 || |||||||| || || |||||| ||||| | | || || || |||||||| | Sbjct 1421540 TGGTTATCTGAGTAGGTAGTAAATG-TCTGGGTCTGCTTTGTGGGGATGGTTGTGTTACG 1421482 Query 517483 ATCAATAATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGAC 517542 | || | | ||||| | || || ||||| || | |||||||||||||||||| || Sbjct 1421481 CTTTATGAGGATAGTCATCACTCCTCCAGCTGTCTCAATACCAAGAGAAAGAGGAGTCAC 1421422 Query 517543 ATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTG 517602 || | || | | | |||| | || | | ||| | | || ||||| || Sbjct 1421421 GTCCAGCAGAAGCAGGTCCTGAACCTCCTCCGACTTGTCTCCAGCCAAGATTGCTGCCTG 1421362 Query 517603 AATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACC 517662 | ||| || ||||| || || || |||||||| || | | | || || | ||| || Sbjct 1421361 TACAGCCGCTCCATACGCCACTGCCTCATCAGGGTTGATCGACTTGTTCAGCTCTTTCCC 1421302 Query 517663 ATTGAAAAA 517671 ||||| || Sbjct 1421301 GTTGAAGAA 1421293 Score = 95.1 bits (104), Expect = 9e-14 Identities = 135/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 518523 CAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 518582 ||||||| || || | || || || || |||| | || || |||||||| |||| Sbjct 1419872 CAAAAATCGTGTTATTGGGGTTCATAGCCACTTGGTTCTTAGCCGCATCTCCGATCAATC 1419813 Query 518583 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 518642 |||||| ||||| || | ||||| || ||||| | || ||||| ||||| |||| Sbjct 1419812 TTTCTGTATCTGTGAAAGCTACATAACTAGGTGTTGTCCTGTTTCCTTGGTCATTAGCAA 1419753 Query 518643 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAA 518702 | |||||||| || |||| ||| | || || ||||| | ||||| || | ||||| Sbjct 1419752 TGATTTCAACCTTTCCATGTTGGAACACGCCAACACATGAGTAGGTTGTGCCAAGATCAA 1419693 Query 518703 TACCAATAGC 518712 |||||| ||| Sbjct 1419692 TACCAACAGC 1419683 >seq1175 Length=632595 Score = 87.8 bits (96), Expect = 1e-11 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 518154 CTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAA 518213 |||| |||| ||||||| | ||||| || ||||| |||||||| ||||||||||| | Sbjct 455140 CTTTATCTTCTGTTTTATCCATGCCATAGGCTAAAGCTGCAGCAGTAGGTTCATTAATCA 455199 Query 518214 TTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGC 518259 | |||||||||||| || ||||| ||||||||||| || || Sbjct 455200 CACGCAAAACATTAAGTCCTGCAATCTGACCTGCATCTTTTGTAGC 455245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3779251227265372