Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zootermopsis_20nevadensis_20[genbank_20GCA_5F000696155.1_202014-06- 05] 31,662 sequences; 485,009,472 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq513 91.5 2e-13 >seq513 Length=652068 Score = 91.5 bits (100), Expect = 2e-13 Identities = 96/124 (77%), Gaps = 2/124 (2%) Strand=Plus/Plus Query 117293 CCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCCCGCTTCT 117352 |||| ||||| |||||||||||||| |||| || || ||||| || |||||||||| Sbjct 206546 CCTCGTCTCGTGAAATAAGTTCATTGCTGAAGGTGAGACCGGGCATAAGTCCCCGCTTCT 206605 Query 117353 TCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAAC 117411 | ||||| | ||||| ||| || || |||||||||||||| ||||| |||||| Sbjct 206606 TTAACCAGAAGATAGCAGCA-AAACTTCCAGAGAAGAAGATACCTTCCACTGCAGCAAAC 206664 Query 117412 GCAA 117415 |||| Sbjct 206665 GCAA 206668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589747300348880