Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zootermopsis_20nevadensis_20[genbank_20GCA_5F000696155.1_202014-06- 05] 31,662 sequences; 485,009,472 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq195 96.9 4e-15 >seq195 Length=1114326 Score = 96.9 bits (106), Expect = 4e-15 Identities = 110/148 (74%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 154957 AGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAACCATGTGAGT 155016 ||||||| ||||||||||| || | |||||||| || || ||| ||| |||| | Sbjct 854461 AGGTATACCTTGATGGAGCTAACATGAATGCACAAGTTGGCCTATGCCGTCCAGGTGACT 854520 Query 155017 ATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCACATGGAGGTG 155076 ||||| | ||||||| |||||| || | |||||||||||||| || || || || || | Sbjct 854521 ATGGTTCTGATGTATCTCATCTGAATCTCCATAAAACATTCTGCATCCCCCACGGTGGCG 854580 Query 155077 GAGGTCCTGGCGTAGGTCCTATAGGTGT 155104 |||| || || | || || || || || Sbjct 854581 GAGGGCCCGGAATGGGACCAATCGGAGT 854608 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578983562054080