Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zootermopsis_20nevadensis_20[genbank_20GCA_5F000696155.1_202014-06- 05] 31,662 sequences; 485,009,472 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq1127 176 4e-38 seq333 170 2e-36 seq950 118 9e-21 seq1259 107 2e-17 seq623 107 2e-17 seq70 96.9 3e-14 seq352 93.3 3e-13 seq394 87.8 1e-11 seq75 87.8 1e-11 >seq1127 Length=1068992 Score = 176 bits (194), Expect = 4e-38 Identities = 396/589 (67%), Gaps = 16/589 (3%) Strand=Plus/Minus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 ||||| || || || | |||||||| ||| ||| |||||||| |||||| | || || Sbjct 1037576 GCTATCGGAATTGACCTTGGAACCACGTATTCTTGCGTTGGTGTCTGGCAACAAGGCAAG 1037517 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 || || || ||||| || |||||||| || | |||||||| ||||| |||||| Sbjct 1037516 GTCGAGATCATTGCAAACGATCAAGGAAATCGCACTACTCCCAGCTATGTGGCTTTCAAC 1037457 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171 | | |||| | | |||| || || || ||| | || | || ||||| | ||| Sbjct 1037456 TACTCCGAACGTCTTATTGGAGACGCCGCTAAAAACCAGGTGGCTATGAATCCCAAAAAT 1037397 Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231 || | || ||||| ||||| | || || ||| | ||| | ||| | |||| Sbjct 1037396 ACAGTCTTCGATGCGAAACGGCTGATCGGTAGACGCTTTGACGATGAAAAGATTCAAAGT 1037337 Query 550232 GATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCT 550291 || ||||||||||||||||| | | || |||| | || || ||| | || | | | Sbjct 1037336 GACATGAAGCATTGGCCTTTTACAGTGGTAAATGACTGCGGGAAGCCTAAAATCCAGG-T 1037278 Query 550292 ACTCATGAAGGATCTGTTAAACAA-----TTTTCACCAGAACAAATTTCATCTATGGTTT 550346 || |||| || ||||| ||| |||||||| | || || ||||| Sbjct 1037277 ACAATATAAGG----GTGAAACACGCAAGTTTGCACCAGAAGAGATCAGCTCCATGGTAC 1037222 Query 550347 TAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACG-GATGCAGTA 550405 | | || ||| | | || || ||||| | ||| | ||| ||| || || ||| Sbjct 1037221 TGACTAAGTTGAGAGAGACGGCAGAGGCTTTCCTGGGTAACACAGT-ACGCGACGCTGTA 1037163 Query 550406 ATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGT 550465 || || || ||||| || || ||||||||||| ||||||||||| ||||| || || Sbjct 1037162 ATCACGGTGCCAGCGTACTTCAATGACTCACAGCGTCAAGCTACAAAAGACGCGGGTACC 1037103 Query 550466 ATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATAT 550525 || || || | || || || || || |||||||| || || || ||||| || || ||| Sbjct 1037102 ATCGCAGGCATCAACGTGCTCCGCATCATCAATGAGCCCACAGCCGCTGCTCTGGCCTAT 1037043 Query 550526 GGACTTGATA--AACATAATGATCAAGAACTTAATGTACTCATCTTTGA 550572 || || || | ||| | | | ||||| |||||||||||||||||| Sbjct 1037042 GGGCTAGACAAGAACCTCA--AGGGAGAACGTAATGTACTCATCTTTGA 1036996 Score = 174 bits (192), Expect = 1e-37 Identities = 532/813 (65%), Gaps = 26/813 (3%) Strand=Plus/Minus Query 551790 GGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGTATCATGGTGTGTTGAA 551849 |||||| | || |||||||| ||||| |||||||| |||||||| | | ||| Sbjct 1036919 GGAGATACCCACCTTGGTGGTGAAGACTTTGATAACCGACTGGTAAGCCACTTGGCTGAT 1036860 Query 551850 GATTTTAAACGAAAAAACAAAGTTGATCTATCTACATCTG---CCAA-AGCTCTTCGTCG 551905 || || || | || ||| || | ||| | | |||| ||| | || || Sbjct 1036859 GAGTTCAAGAGGAAGTTCAA----GAAAGACATACGTGGGAATCCAAGAGCATTGCGACG 1036804 Query 551906 TCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTAT 551965 || ||||| || || ||||| || ||| | ||||| || |||| | | | || Sbjct 1036803 ACTCAGAACAGCAGCTGAGAGAGCAAAGCGAACCCTTTCTTCCAGTACAGAGGCAAGCAT 1036744 Query 551966 TGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATT 552025 |||| | ||| | || |||| || || |||| || || | || || || || Sbjct 1036743 TGAAATTGATGCCTTGGTTGATGGTATCGATTTCTATTCGAAAGTCTCAAGAGCACGGTT 1036684 Query 552026 TGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAG 552085 ||| || ||||| ||||||| || | ||| | | || |||||| ||| | | Sbjct 1036683 TGAGGAACTTTGTGCTGATCTTTTCCGTTCGACACTGCACCCTGTAGAAAAAGCACTGAC 1036624 Query 552086 AGATTCAAAGATTGATAAA---TCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTAC 552142 |||| ||||| |||| || || | ||||||| | ||||| || ||||| || || Sbjct 1036623 AGATGCAAAGCTTGACAAGGGGTCGA---TACATGACGTGGTGCTAGTGGGTGGCTCAAC 1036567 Query 552143 AAGAATTCCTAAAATTCGCGAAATG-TTAAGTTCTTATTTCAATGGTAAAAAATTAAATG 552201 ||||||| || || | | || || || || | ||| ||| ||| | | | Sbjct 1036566 TCGAATTCCAAAGATCCAGAATCTGCTTCAGAACT-ACTTCTGTGGGAAACAGCT----G 1036512 Query 552202 AAAGTGTTAATCCA----GATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATT 552257 || ||| ||| | ||||||||||| || ||||| || || | ||||| |||||| Sbjct 1036511 AACCTGTCCATCAACCCTGATGAGGCTGTCGCATATGGGGCAGCTGTGCAAGCTGCTATT 1036452 Query 552258 CTTTCTGGACAAACT-GATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCT 552316 || |||| | || | | | | | | ||| || || || | || ||||| || || || Sbjct 1036451 CTGAGTGGAGACACCAGCTCACAGA-TCCAAGATGTTCTATTGGTGGATGTGACGCCGCT 1036393 Query 552317 ATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTAC 552376 || |||||| | || |||| ||| || ||||||| ||| | ||||| | || || Sbjct 1036392 TTCCCTTGGTATCGAGACAGCTGGTGGAGTTATGACGAATATCATCGAACGTAACTCTCG 1036333 Query 552377 TATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTAC 552436 || ||||| | | | | | || | |||||||| || ||||| ||||||| || Sbjct 1036332 CATCCCTTGCAGACAGACGCAGACCTTCACAACGTATTCTGACAATCAGCCTGCTGTCAC 1036273 Query 552437 AATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTT 552496 || || | || ||||| || || | | ||| ||| || |||| || || ||||| Sbjct 1036272 CATACAGGTGTTCGAAGGCGAGCGAGCAATGACTCGAGACAACAATCTCCTAGGAACTTT 1036213 Query 552497 TAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGA 552556 ||| | ||| |||||||| || |||||||| || || | | || || || ||| | Sbjct 1036212 CAATCTCACAGGCATTCCTCCAGCACCTCGTGGTGTGCCAAAGGTAGAGGTCACATTCAA 1036153 Query 552557 TATCGATGCCAATGGAATTTTGAATGTGACTGC 552589 || ||||||||||| ||| |||||||| |||| Sbjct 1036152 CATTGATGCCAATGGTATTGTGAATGTGTCTGC 1036120 >seq333 Length=963072 Score = 170 bits (188), Expect = 2e-36 Identities = 315/458 (69%), Gaps = 12/458 (3%) Strand=Plus/Minus Query 368611 TGGGGAACTCCAATTCCAGTATGGAAATCTGATGATGGTGAAGAAATTGTTTGTATAGGT 368670 ||||| || ||||||||| |||||| || ||||||||||| || || ||| | ||| Sbjct 89123 TGGGGTACACCAATTCCATTATGGATGTCACCAGATGGTGAAGAGATAGTATGTGTTGGT 89064 Query 368671 TCAATTAAAGAATTGCAAGAATTATCTGGTGTGCAAAATATTAGTGATTTACATATTGAT 368730 ||| ||| || ||||| || |||| | ||| | ||||| |||||| || Sbjct 89063 AGCATTGCAGAGTTACAAGAGTTGACTGGCAT---AAAAGTCAGTGACCTACATAGAGAA 89007 Query 368731 AAAATTGATCACATTAAAATTCCATCA--AAGAA-AGGAAAAGGTTTATTGTCTCGAGTT 368787 || || || || | | ||||||||| | || ||| ||| | ||| |||| Sbjct 89006 AATATCGACCATCTGAGTATTCCATCAGTACGACCAGGCAAACCTCCATTAAAAAGAGTA 88947 Query 368788 GAAGGAGTTTTGGATTGCTGGTTTGAATCAGGTTCTATGCCTTATGGTCAAATACATTAT 368847 || ||| || ||||||||||||||||| || ||||||||||||| || |||| ||| Sbjct 88946 TCAGAAGTATTTGATTGCTGGTTTGAATCTGGCTCTATGCCTTATGCACAGTTACACTAT 88887 Query 368848 CCATTTGATAACGCAAAATACTTTGATAATGATAAAGATTATGTGGCTGATTTTGTAACA 368907 |||||| | || ||| | ||||| | | | || | ||||||||| | | Sbjct 88886 CCATTTAAGCACAGAAAGGAATTTGA-----AGACTG-TTTTCCAGCTGATTTTATTGCT 88833 Query 368908 GAATCAATTGATCAAACACGTGGTTGGTTTTATACCCTATTAGTATTATCCACAGCTATT 368967 ||| |||||||| || | || |||||||| || ||| | || | || || || || Sbjct 88832 GAAGGTATTGATCAGACTAGAGGATGGTTTTACACTCTACTGGTTATTTCAACTGCACTT 88773 Query 368968 TTCGATAAACCGGCTTTTAAAAATGTAATAGTAACTGGTATTGTTAATGCATCTGATGGT 369027 ||| |||| || ||||||| || | || | || |||| | || |||||| ||||| Sbjct 88772 TTCAATAAGCCACCTTTTAAGAACCTCATTGCAAATGGTTTGGTGCTTGCATCAGATGGA 88713 Query 369028 CAAAAGATGTCAAAAAGTAAGGGTAATTATTCCGATCC 369065 ||||| ||||||||| | ||| |||||| | ||||| Sbjct 88712 CAAAAAATGTCAAAACGAAAGAAAAATTATCCTGATCC 88675 >seq950 Length=836093 Score = 118 bits (130), Expect = 9e-21 Identities = 156/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 563262 GAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATC 563321 ||| || |||||||| ||| ||| || ||||| ||||||| || |||| ||| Sbjct 302166 GAGGACGAGATGAAGTGTAGATTCCTTCTGGATATTATAATCAGAGAGGGTTCGGCCATC 302225 Query 563322 TTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATC 563381 || || || || || ||||| || |||| ||||| || || ||||||||||| || || Sbjct 302226 CTCCAGCTGCTTGCCAGCAAAGATCAGTCGCTGCTGGTCTGGTGGAATTCCTTCCTTGTC 302285 Query 563382 TTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGTAACAG 563440 ||| || || ||| || |||||| ||||||| || | || ||| | ||||| | Sbjct 302286 TTGGATCTTGGCTTTCACATTCTCAATCGTATCAG-ATGCTTCCACTTCTAAAGTAATGG 302344 Query 563441 TTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | || ||||| |||||||| |||||||| ||||| Sbjct 302345 TCTTGCCAGTCAGAGTTTTCACGAAAATCTGCAT 302378 Score = 98.7 bits (108), Expect = 8e-15 Identities = 157/223 (70%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 563253 CCTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGT 563312 || |||||| || ||||| || || ||| ||||| ||||| ||||| | || || Sbjct 297484 CCGGAGACGAAGCACAAGGTGGAGTGTAGACTCTTTCTGGATATTATAATCTGAGAGGGT 297543 Query 563313 TCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCC 563372 || ||| || || || || || ||||| || |||| ||||| || || ||||| || Sbjct 297544 TCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATCAGTCGCTGCTGGTCTGGTGGAATGCC 297603 Query 563373 TTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGA 563431 |||||| || || || || ||| || |||||||||||||| | ||| ||| | Sbjct 297604 TTCTTTGTCCTGGATCTTGGCTTTCACGTTCTCAATTGTATCAGAAGCCTCTAC-TTCCA 297662 Query 563432 GAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 |||||| ||||| || || | ||||| || || || ||||| Sbjct 297663 GAGTAATGGTTTTTCCTGTCAAGGTTTTGACAAATATCTGCAT 297705 >seq1259 Length=610742 Score = 107 bits (118), Expect = 2e-17 Identities = 116/154 (75%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 |||| |||| |||||| | ||||| || || ||||| || || |||||| |||| || Sbjct 99972 AGCTGTAGGAATAGATCTTGGAACTACGTACTCCTGTGTCGGAGTATGGCAACATGGAAA 99913 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 ||| ||||||||||| ||||||||||| || | || || ||| |||||| | || || Sbjct 99912 AGTGGAAATTATTGCAAATGATCAAGGGAATCGGACAACGCCAAGTTATGTGGCCTTTAC 99853 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAA 550144 || || |||| ||| |||| ||||| || ||| Sbjct 99852 TGATACGGAACGATTAATTGGCGATGCTGCCAAA 99819 >seq623 Length=111817 Score = 107 bits (118), Expect = 2e-17 Identities = 135/183 (74%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 563293 ATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTT 563352 |||||||| |||| || || | |||||| | || ||||| |||||||| | | | Sbjct 110338 ATATTGTAGTCAGAAAGTGTACGACCATCTTCCAACTGCTTTCCTGCAAAAATTAAACGT 110397 Query 563353 TGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTA 563412 || |||||||||||||||||||| || || ||||||||| ||| || ||||| || Sbjct 110398 TGTTGATCAGGAGGAATTCCTTCCTTGTCCTGAATTTTTGCTTTAACGTTTTCAATGGTG 110457 Query 563413 TCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTG 563471 |||| || || ||| ||| ||| ||||| ||||| ||||| || || || ||||| Sbjct 110458 TCAGACGTTTCCAC-TTCAAGAATAATGGTTTTTCCAGTGAGAGTCTTCACAAAGATTTG 110516 Query 563472 CAT 563474 ||| Sbjct 110517 CAT 110519 >seq70 Length=429657 Score = 96.9 bits (106), Expect = 3e-14 Identities = 156/221 (71%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315 ||| || || || | || ||||| |||||| || |||||||| | || || | Sbjct 142568 GAGGCGAAGAACCAAGTGCAGGGTTGATTCTTTATGGATGTTGTAATCTGATAAGGTGCG 142509 Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375 ||| || | ||| || || |||||||| | | ||| |||| ||||||||||||||| Sbjct 142508 GCCATCCTCCAATTGCTTGCCAGCAAAAATTAAACGTTGTTGATGAGGAGGAATTCCTTC 142449 Query 563376 TTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA--TTCGAGA 563433 || || ||||||||| |||| | |||| || |||| || || || ||| ||| Sbjct 142448 CTTGTCCTGAATTTTTCGTTTCAAGTTTTCAACGGTGTCAG-ATG-GTTCAACTTCAAGA 142391 Query 563434 GTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 |||| ||||| ||||| ||||| || || || | |||||| Sbjct 142390 GTAATGGTTTTTCCAGTGAGAGTCTTCACAAAGACTTGCAT 142350 >seq352 Length=269356 Score = 93.3 bits (102), Expect = 3e-13 Identities = 132/183 (72%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 563293 ATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTT 563352 |||||||| |||| | || | |||||| | || ||||| |||||||| | | | Sbjct 29313 ATATTGTAGTCAGAAATTGTACGACCATCTTCCAACTGCTTTCCTGCAAAAATTAAACGT 29372 Query 563353 TGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTA 563412 || |||||||| ||||||||||| || || | | ||| |||| || | ||||| || Sbjct 29373 TGTTGATCAGGGGGAATTCCTTCCTTGTCGTTGAGTTTGCGTTTCACGTCTTCAATGGTG 29432 Query 563413 TC-AGTGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTG 563471 || | || || ||| |||||||| ||||| ||||| ||||| || || || ||||| Sbjct 29433 TCAAACGTTTCCAC-TTCAAGAGTAACGGTTTTTCCAGTGAGAGTCTTCACAAAGATTTG 29491 Query 563472 CAT 563474 ||| Sbjct 29492 CAT 29494 >seq394 Length=806705 Score = 87.8 bits (96), Expect = 1e-11 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 563253 CCTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGT 563312 ||| || || || || || ||||| ||| ||| || |||||| ||||||| || || Sbjct 96978 CCTCAGGCGTAGAACTAGGTGAAGTGTAGATTCCTTTTGAATATTATAATCAGATAATGT 96919 Query 563313 TCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCC 563372 || |||||||||||||||||| |||||||| || | ||||||||||| || || || Sbjct 96918 TCGACCATCTTCAAGTTGTTTTCCAGCAAAAATCAGGCGCTGCTGATCAGGGGGGATACC 96859 Query 563373 T 563373 | Sbjct 96858 T 96858 >seq75 Length=3442531 Score = 87.8 bits (96), Expect = 1e-11 Identities = 129/182 (71%), Gaps = 3/182 (2%) Strand=Plus/Plus Query 550026 GTGTTGGTGTTTGGCAAAATGGTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAA 550085 |||||||||| | | |||||| || ||||||||||| |||||||| || || |||| Sbjct 2937587 GTGTTGGTGTCTATAAGAATGGTCGTGTGGAAATTATTGCAAATGATCAGGGAAATAGAA 2937646 Query 550086 CTACTCCATCTTATGTTTCTTTCA---CGGAAACTGAACATTTAGTTGGTGATGCAGCAA 550142 |||||| || ||||| | |||| | ||| ||| || |||| ||||| || | Sbjct 2937647 TTACTCCTTCATATGTGGCATTCACACCTGAAGGTGAGAGGTTGATTGGAGATGCTGCCA 2937706 Query 550143 AATATCAAGCCACTGGTAATCCTACCAATACTATTTTTGATGCTAAACGTTTAATTGGAA 550202 || | ||| || | ||||| || ||| | |||||||| |||||| | ||||| | Sbjct 2937707 AAAACCAACTTACAGCAAATCCAGAAAACACTGTGTTTGATGCCAAACGTCTTATTGGCA 2937766 Query 550203 GA 550204 || Sbjct 2937767 GA 2937768 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4027621570644380