Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zootermopsis_20nevadensis_20[genbank_20GCA_5F000696155.1_202014-06- 05] 31,662 sequences; 485,009,472 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq70 154 1e-32 seq623 149 5e-31 seq352 140 3e-28 seq950 134 1e-26 seq583 118 8e-22 seq1183 109 4e-19 seq1068 87.8 1e-12 >seq70 Length=429657 Score = 154 bits (170), Expect = 1e-32 Identities = 160/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 101260 AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTC 101319 ||| || || ||||| |||||||| || || |||||||| | | || | | |||| || Sbjct 142559 AACCAAGTGCAGGGTTGATTCTTTATGGATGTTGTAATCTGATAAGGTGCGGCCATCCTC 142500 Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379 ||||||||| || ||||| || ||||| ||||||| || ||||| ||||| || || || Sbjct 142499 CAATTGCTTGCCAGCAAAAATTAAACGTTGTTGATGAGGAGGAATTCCTTCCTTGTCCTG 142440 Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439 ||||||| |||| | |||| || |||||||| | ||| ||||||||||| | ||||| Sbjct 142439 AATTTTTCGTTTCAAGTTTTCAACGGTGTCAGATGGTTCAACTTCAAGAGTAATGGTTTT 142380 Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || | ||| || ||||| | ||||| Sbjct 142379 TCCAGTGAGAGTCTTCACAAAGACTTGCAT 142350 >seq623 Length=111817 Score = 149 bits (164), Expect = 5e-31 Identities = 147/190 (77%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 101280 CTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATA 101339 |||| ||||||||||| || | | || | |||| ||||| ||||| |||||||| | Sbjct 110330 CTTTCTGTATATTGTAGTCAGAAAGTGTACGACCATCTTCCAACTGCTTTCCTGCAAAAA 110389 Query 101340 TCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTT 101399 | ||||| |||||||| || ||||| ||||| || || ||||||||| ||| || ||| Sbjct 110390 TTAAACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCCTGAATTTTTGCTTTAACGTTTT 110449 Query 101400 CTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAA 101459 | | |||||||||||||||||||||||| | | ||||| || || | ||| || |||| Sbjct 110450 CAATGGTGTCAGACGTTTCCACTTCAAGAATAATGGTTTTTCCAGTGAGAGTCTTCACAA 110509 Query 101460 ATATCTGCAT 101469 | || ||||| Sbjct 110510 AGATTTGCAT 110519 Score = 105 bits (116), Expect = 5e-18 Identities = 150/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 101260 AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTC 101319 ||| ||||| ||||| |||||||| || || |||||||| | | || | | |||| || Sbjct 107665 AACCAAATGCAGGGTTGATTCTTTCTGGATGTTGTAATCTGATAAGGTACGGCCATCCTC 107724 Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379 ||||||||| || ||||| || | ||||| || | || || || ||||| || || || Sbjct 107725 CAATTGCTTGCCAGCAAAGATAAGTCGCTGCTGGCCAGGAGGGATACCTTCCTTGTCCTG 107784 Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439 || ||| ||| || | || | || |||| | || || || ||||||| || || Sbjct 107785 GATCTTTGCTTTCACGTTCTCAATGGTATCAGCTGGCTCTACCTCCAGAGTGATGGTCTT 107844 Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || || | || || ||||| ||||||||| Sbjct 107845 CCCTGTCAGGGTCTTCACAAAAATCTGCATG 107875 >seq352 Length=269356 Score = 140 bits (154), Expect = 3e-28 Identities = 145/190 (76%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 101280 CTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATA 101339 |||| ||||||||||| || | || || | |||| ||||| ||||| |||||||| | Sbjct 29305 CTTTCTGTATATTGTAGTCAGAAATTGTACGACCATCTTCCAACTGCTTTCCTGCAAAAA 29364 Query 101340 TCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTT 101399 | ||||| |||||||| || ||||| ||||| || || | | ||| |||| || || Sbjct 29365 TTAAACGTTGTTGATCAGGGGGAATTCCTTCCTTGTCGTTGAGTTTGCGTTTCACGTCTT 29424 Query 101400 CTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAA 101459 | | |||||| ||||||||||||||||||| || ||||| || || | ||| || |||| Sbjct 29425 CAATGGTGTCAAACGTTTCCACTTCAAGAGTAACGGTTTTTCCAGTGAGAGTCTTCACAA 29484 Query 101460 ATATCTGCAT 101469 | || ||||| Sbjct 29485 AGATTTGCAT 29494 >seq950 Length=836093 Score = 134 bits (148), Expect = 1e-26 Identities = 152/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || || ||||| ||||| || ||||| ||||| | || |||| | |||| |||| ||| Sbjct 297503 TGGAGTGTAGACTCTTTCTGGATATTATAATCTGAGAGGGTTCGGCCATCCTCCAGCTGC 297562 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || ||||| |||| ||||| || || || |||||||||||||| || || || || Sbjct 297563 TTGCCAGCAAAGATCAGTCGCTGCTGGTCTGGTGGAATGCCTTCTTTGTCCTGGATCTTG 297622 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 ||| || | || | || ||||| | || ||||| ||||| | ||||| || || Sbjct 297623 GCTTTCACGTTCTCAATTGTATCAGAAGCCTCTACTTCCAGAGTAATGGTTTTTCCTGTC 297682 Query 101447 AAAGTTTTTACAAATATCTGCATG 101470 || ||||| ||||||||||||||| Sbjct 297683 AAGGTTTTGACAAATATCTGCATG 297706 Score = 123 bits (136), Expect = 2e-23 Identities = 142/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 101280 CTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATA 101339 |||| || || ||||| || | | ||||| | |||| |||| ||||| || ||||| | Sbjct 301961 CTTTCTGGATGTTGTAGTCCGACAAAGTTCGGCCATCTTCCAGCTGCTTGCCAGCAAAGA 302020 Query 101340 TCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTT 101399 ||| ||||| || || || ||||||||||| || ||||| || || ||| ||| | | Sbjct 302021 TCAGTCGCTGCTGGTCTGGTGGAATGCCTTCCTTGTCTTGGATCTTGGCTTTCACATTCT 302080 Query 101400 CTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAA 101459 | | || || || | |||||||| | ||| | ||||||||| || || ||||| || | Sbjct 302081 CAATCGTATCTGATGCCTCCACTTCCAAAGTAATCGTTTTGCCTGTCAAGGTTTTGACGA 302140 Query 101460 ATATCTGCATG 101470 ||||||||||| Sbjct 302141 ATATCTGCATG 302151 Score = 109 bits (120), Expect = 4e-19 Identities = 147/204 (72%), Gaps = 3/204 (1%) Strand=Plus/Plus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 ||| || || |||||||| || | |||||||| | || | |||| |||| || Sbjct 300672 ATGGAGTGTTGATTCTTTCTGGTTGTTGTAATCC---AGTGTGCGTCCATCCTCCAGCTG 300728 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 ||| || ||||| |||| ||||||||||| || ||||| |||||||| || ||||| || Sbjct 300729 CTTGCCAGCAAAGATCAGTCGCTGTTGATCAGGTGGAATTCCTTCTTTGTCCTGAATCTT 300788 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 ||| ||| | || | || ||||| | || ||||| | |||| || ||||| || Sbjct 300789 GGCTTTAACATTCTCAATCGTATCAGAAGCCTCTACTTCCAATGTGATTGTCTTGCCTGT 300848 Query 101446 TAAAGTTTTTACAAATATCTGCAT 101469 | ||| || ||||| |||||||| Sbjct 300849 CAGAGTCTTAACAAAGATCTGCAT 300872 >seq583 Length=527131 Score = 118 bits (130), Expect = 8e-22 Identities = 139/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 101282 TTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATC 101341 || || ||||| ||||| | | || | |||| || |||||||| || ||||| ||| Sbjct 233046 TTCTGAATATTATAATCCGACAACGTGCGACCATCTTCTAATTGCTTCCCAGCAAAGATC 232987 Query 101342 AAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCT 101401 || |||||||| || || || || ||||||||||||||||| || || ||| ||||| Sbjct 232986 AATCGCTGTTGGTCCGGTGGGATACCTTCTTTATCTTGAATCTTAGCCTTGACATTTTCT 232927 Query 101402 ACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAAT 101461 | || || |||| || ||||| || || | ||||| || |||| |||||||| || Sbjct 232926 ATGGTATCCGACGCCTCAACTTCGAGGGTTATAGTTTTACCCGTTAGGGTTTTTACGAAA 232867 Query 101462 ATCTGCAT 101469 || ||||| Sbjct 232866 ATTTGCAT 232859 >seq1183 Length=31732 Score = 109 bits (120), Expect = 4e-19 Identities = 138/190 (73%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 101280 CTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATA 101339 |||| ||||||||||| || | || || | |||| | ||| ||||| |||||||| Sbjct 17238 CTTTCTGTATATTGTAGTCAGAGAGTGTACGATCATCTTTCAACTGCTTTCCTGCAAAAT 17297 Query 101340 TCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTT 101399 | || || |||||||| | ||||| ||||| || || | | | |||||| || ||| Sbjct 17298 TTAATCGTTGTTGATCAGAGGGAATTCCTTCCTTTTCCTCTAGATGTTGTTTCACGTTTT 17357 Query 101400 CTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAA 101459 | | ||||| || | ||| ||||||||||| ||||| || || | |||||| |||| Sbjct 17358 CAATGGTGTCTGAAGGTTCAACTTCAAGAGTACAGGTTTTTCCAGTGAGAGTTTTCACAA 17417 Query 101460 ATATCTGCAT 101469 | || ||||| Sbjct 17418 AGATTTGCAT 17427 Score = 104 bits (114), Expect = 2e-17 Identities = 153/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| || || || || ||||| |||||||| || || |||||||| | | || | | | Sbjct 15664 ACGCAATACCAAGTGGAGGGTGGATTCTTTCTGGATGTTGTAATCTGATAAGGTGCGGCC 15723 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| ||||||||||| || ||||| || | ||||| || || || || || ||||| || Sbjct 15724 ATCTTCCAATTGCTTGCCAGCAAAGATAAGTCGCTGCTGCTCAGGGGGGATACCTTCCTT 15783 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 || || | |||| |||| | | || | || |||| | || || || ||||||| Sbjct 15784 GTCCTGCAGCTTTTTCTTTAGATTCTCAATGGTATCAGCTGGCTCTACCTCCAGAGTGAT 15843 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || || || || | || || || || ||||||||| Sbjct 15844 GGTCTTCCCTGTCAGGGTCTTCACGAAAATCTGCATG 15880 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 101260 AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTC 101319 ||| || || ||||| ||| |||| || || |||||||| | | || | | |||| || Sbjct 15442 AACCAAGTGCAGGGTTGATCCTTTCTGGATGTTGTAATCTGATAAGGTGCGGCCATCTTC 15501 Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379 ||||||||| || ||||| || | ||||| || || || || || ||||| || || || Sbjct 15502 CAATTGCTTGCCAGCAAACATAAGTCGCTGCTGCTCAGGGGGGATACCTTCCTTGTCCTG 15561 Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439 | |||| |||| | | || | || |||| | || || || ||||||| || || Sbjct 15562 CAGCTTTTTCTTTAGATTCTCAATGGTATCAGCTGGCTCTACCTCCAGAGTGATGGTCTT 15621 Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || | || || ||||| |||||||| Sbjct 15622 CCCTGTCAGGGTCTTCACAAAAATCTGCAT 15651 >seq1068 Length=143541 Score = 87.8 bits (96), Expect = 1e-12 Identities = 155/226 (69%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || |||| | ||| | ||| |||| ||||| |||| ||| || || |||||||| | Sbjct 133773 CCACCTCGGAGACGAAGAACCGAATGCAGGGTTGATTATTTCTGGATGTTGTAATCTGAT 133832 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||| | | |||| ||||||||||| || ||||| | | |||| || || || || Sbjct 133833 AAAGTGCGGCCATCCTCCAATTGCTTGCCAGCAAAGACAAGTCGCTACTGGTCAGGGGGG 133892 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| || || || | ||| |||||| | || | || | || || || Sbjct 133893 ATACCTTCCTTTTCCTGGAGCTTTGCCTTTACATTCTCAATGGTATTAGCTTGCTCTACC 133952 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCA 101468 || ||||||| || || || || | || || ||||| ||||||| Sbjct 133953 TCCAGAGTGATGGTCTTCCCTGTCAGGGTCTTCACAAAAATCTGCA 133998 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396125483843334