Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zootermopsis_20nevadensis_20[genbank_20GCA_5F000696155.1_202014-06- 05] 31,662 sequences; 485,009,472 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq513 96.9 6e-15 >seq513 Length=652068 Score = 96.9 bits (106), Expect = 6e-15 Identities = 133/186 (72%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 48181 GAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCC 48240 |||| |||||| ||||| | |||| || || | |||||| || || || ||| || Sbjct 206574 GAAGGTGAGACCGGGCATAAGTCCCCGCTTCTTTAACCAGAAGATAGCAGCAAAACTTCC 206633 Query 48241 AGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTT 48300 |||||||||||| || |||||||| || ||||| | ||||| || || | || | Sbjct 206634 AGAGAAGAAGATACCTTCCACTGCAGCAAACGCAACCACTCTCTCACCAAACGTCGCAGT 206693 Query 48301 CTTGTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTC 48360 | || | ||||| ||| ||||| ||||||||||| || | || ||||||||||| Sbjct 206694 TTCGTGCGCTATCCACTGAAGGGCCCAATCTGCCTTCTTTTTCACACACGGCATCGTCTC 206753 Query 48361 TATGGC 48366 | ||| Sbjct 206754 AACGGC 206759 Score = 87.8 bits (96), Expect = 3e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 48425 TACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCA 48484 ||||| || || || ||||| || || || ||||| || || |||||| || || || Sbjct 207398 TACATTTCTGAATGGACATTTTCCATCGCTATCTGAAAGCCATAGAAGCATCTTGCTTCT 207457 Query 48485 AACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAA 48544 || || ||||| | ||||||||| | || ||||||||| || || ||||||||| Sbjct 207458 GTTACTTGTACTTCCTGGCTGAATCTCTCTACCAAATTCTCATTAACAATTCCATCTGAA 207517 Query 48545 GCAGCAAAGAAGGCAAGGACATG 48567 || ||||| || || || ||||| Sbjct 207518 GCTGCAAAAAATGCTAGTACATG 207540 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931164122606080