Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zootermopsis_20nevadensis_20[genbank_20GCA_5F000696155.1_202014-06- 05] 31,662 sequences; 485,009,472 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq571 91.5 2e-13 >seq571 Length=387064 Score = 91.5 bits (100), Expect = 2e-13 Identities = 94/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 47940 TCTTGTAATCTTACGAGTTACAAAAGTTTCACCACGTCTTGGAGATTCATGATTAAAAAG 47999 ||| ||||| || | |||||||||| ||||||| | || |||| ||||| |||||||| Sbjct 135585 TCTCGTAATTTTTCTAGTTACAAAATTTTCACCTCTTCGTGGACTCTCATGGTTAAAAAG 135526 Query 48000 AATACCACTACAGGCATACATTCCGTATGATTCACGATAGTTCTTTACTATCCAGTACCC 48059 || ||| |||||||| |||| |||| ||| || || ||| ||||||||||| || Sbjct 135525 GATTCCATTACAGGCAAACATCTGATATGCTTCCCGGTAATTCACCACTATCCAGTATCC 135466 Query 48060 ATA 48062 || Sbjct 135465 GTA 135463 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665231013953840