Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zootermopsis_20nevadensis_20[genbank_20GCA_5F000696155.1_202014-06- 05] 31,662 sequences; 485,009,472 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq31 100 8e-16 seq95 87.8 5e-12 >seq31 Length=1021504 Score = 100 bits (110), Expect = 8e-16 Identities = 156/223 (70%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 302616 AGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAG 302675 || ||| || |||||||||||||| ||||| | || || |||||||||||||| || | Sbjct 777185 AGCTGTCTTGACAGCTGTATCAATGAGACCTTCTCGTCCTCCCATAGCATGGAAAAAGAA 777126 Query 302676 CTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGA 302735 ||| || ||||| | | | | ||| | || || ||||| | | || || Sbjct 777125 CTCGGAGGGAGTAAGCCCAGCCAGATACGAGTTTTCTACAAAACCTCTTGATTCTGGACC 777066 Query 302736 ATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTT 302795 || ||| |||| | ||||| ||||| ||||| ||| | | ||| | || || || || Sbjct 777065 ATAATCGTCCTTGATGAAGTGAGGCAGCGTCCTCTTCCGAAATCCGAAAGGAATGCGTTT 777006 Query 302796 TCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAA 302838 || |||||||||||||| |||| || | ||| | |||| || Sbjct 777005 CCCTTCAACGTTCTGCTGACCCACACAAGCAATAACCTGCAAA 776963 >seq95 Length=16868 Score = 87.8 bits (96), Expect = 5e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 156060 TTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATA 156119 |||||||| || || ||||| || || || || || | || | | |||||| | ||| Sbjct 7357 TTGCCACCTTGGTCCACATATCGTGCTGTGTTGTTATAAACTCTCAACATAGGCACAATG 7416 Query 156120 CCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAATA 156179 ||||| |||||||||||||| || |||| ||| || | | ||| | |||||| || Sbjct 7417 CCATTCGAAGTGCCATTGGTGCCAGCTATATACGAGCCTGTAGCGCGGATATTATGGATG 7476 Query 156180 TGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAA 156239 || ||||| || ||||| | | |||||||| | || |||| || | || | || Sbjct 7477 TGGAGTCCGATTCCACCAGCAGACTTAGAAATCAGTGCACATTGTTTCAGTGTGTCATAA 7536 Query 156240 ATACCTTCAAT 156250 || || ||||| Sbjct 7537 ATTCCCTCAAT 7547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471220528674094