Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zootermopsis_20nevadensis_20[genbank_20GCA_5F000696155.1_202014-06- 05] 31,662 sequences; 485,009,472 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq11874 89.7 7e-13 >seq11874 Length=239 Score = 89.7 bits (98), Expect = 7e-13 Identities = 68/79 (86%), Gaps = 1/79 (1%) Strand=Plus/Plus Query 50802 ACTACACATCTCAAACTACACTAATTTGGTAGTTTATCCACAAACTAATAGTCTAAAAAG 50861 |||| || || ||||||| |||||||| ||||||||||||||||||||| | || ||||| Sbjct 147 ACTAGACTTCCCAAACTATACTAATTTAGTAGTTTATCCACAAACTAATTGACTTAAAAG 206 Query 50862 TAG-TAAAAATAGTGGTTA 50879 ||| |||||| | |||||| Sbjct 207 TAGTTAAAAAGAATGGTTA 225 Score = 89.7 bits (98), Expect = 7e-13 Identities = 68/79 (86%), Gaps = 1/79 (1%) Strand=Plus/Plus Query 175820 ACTACACATCTCAAACTACACTAATTTGGTAGTTTATCCACAAACTAATAGTCTAAAAAG 175879 |||| || || ||||||| |||||||| ||||||||||||||||||||| | || ||||| Sbjct 147 ACTAGACTTCCCAAACTATACTAATTTAGTAGTTTATCCACAAACTAATTGACTTAAAAG 206 Query 175880 TAG-TAAAAATAGTGGTTA 175897 ||| |||||| | |||||| Sbjct 207 TAGTTAAAAAGAATGGTTA 225 Score = 84.2 bits (92), Expect = 3e-11 Identities = 67/79 (85%), Gaps = 4/79 (5%) Strand=Plus/Plus Query 50941 AGATTTTGAAAATCTTGAATTGAGAGTTGGGAAAAGGTCGTGACG--CGCACTACTTTTT 50998 |||||||||||||||||||||| | |||| |||| | | |||| ||||||||||||| Sbjct 46 AGATTTTGAAAATCTTGAATTGCAACTTGGAAAAA--TTGAGACGCTCGCACTACTTTTT 103 Query 50999 CTAATTTGTGTTCAAAATT 51017 | |||||||||||||||| Sbjct 104 TTGATTTGTGTTCAAAATT 122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632239276428560