Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zootermopsis_20nevadensis_20[genbank_20GCA_5F000696155.1_202014-06- 05] 31,662 sequences; 485,009,472 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq666 141 8e-29 seq950 95.1 1e-14 >seq666 Length=408878 Score = 141 bits (156), Expect = 8e-29 Identities = 201/283 (71%), Gaps = 0/283 (0%) Strand=Plus/Minus Query 34204 GGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTGATAA 34263 || ||||| || | |||||| |||||||| ||||| ||| | || | || ||||| Sbjct 69745 GGAGGGTTCTTGATTATGAAAGTGTTGAGTTTATGGTTGAATTCAAGTGGTCCATGATAC 69686 Query 34264 CCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGATGAGCTCAGTC 34323 || || || ||||| | || ||| | |||||| | || | ||| || Sbjct 69685 CCACAAGCCTTGCATGCTTGGTTGATGGTTGACTTTTTCTGGCTTACAGTCAGCGTGGTT 69626 Query 34324 TCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGGTCC 34383 || || |||||||| || || |||| |||||||||||| |||||||||||||||| ||| Sbjct 69625 TCTGGATTGTCACACTCGGGGCACAGCACAAACTTGCGAATGAAACCATCAAGCAAGTCT 69566 Query 34384 TGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATCGACC 34443 || | ||| | ||||| || ||||| || || || || ||||| ||| |||| | | Sbjct 69565 TGCAGCTTTGTCGCATCGTGCGAACCGTTCACAATAAAGCGGTCGTTCTTGAAATCAAAC 69506 Query 34444 TGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGT 34486 || || || || ||||| || || || ||||| ||||| |||| Sbjct 69505 TGGGTCTGAGCTCCCAGTTCACAGCCAAAGTATTTTGTTGGGT 69463 Score = 134 bits (148), Expect = 1e-26 Identities = 122/154 (79%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 34490 TGGCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGC 34549 |||| || | ||| | || ||||||| || ||| |||||||||||||||||||||| Sbjct 69059 TGGCAGGTCTTCCTATAGCTTTGGCGACATCTATCATATTGACGATGACAGTCTTGATGC 69000 Query 34550 CGTTGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGT 34609 | || ||||| || || |||||||| | || ||| ||||| ||||| ||||||||||| | Sbjct 68999 CATTACCCTTGCCCTCAACCTTGGCACGGAGGCGAGGCATCTTGTACCGGTAGAACGCAT 68940 Query 34610 CCGCCACATTGCGGTTAACGTTCACAGTCCCCAT 34643 | |||| ||||||| || |||||| ||||||| Sbjct 68939 CGCTCACACTGCGGTTTACATTCACACTCCCCAT 68906 >seq950 Length=836093 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| |||||||||||||| || || || ||||||||||| | ||| ||| || Sbjct 297705 ATGCAGATATTTGTCAAAACCTTGACAGGAAAAACCATTACTCTGGAAGTAGAGGCTTCT 297646 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 ||||| | | | || ||| ||||| |||||||||||| | || || || Sbjct 297645 GATACAATTGAGAACGTGAAAGCCAAGATCCAGGACAAAGAAGGCATTCCACCAGACCAG 297586 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || |||| || | ||| || || ||||||||||||| | |||| | | ||||| || Sbjct 297585 CAGCGACTGATCTTTGCTGGCAAGCAGCTGGAGGATGGCCGAACCCTCTCAGATTATAAT 297526 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTG 110482 || || ||||| ||||| | ||| | ||| Sbjct 297525 ATCCAGAAAGAGTCTACACTCCACCTTGTG 297496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412682292425366