Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zootermopsis_20nevadensis_20[genbank_20GCA_5F000696155.1_202014-06- 05] 31,662 sequences; 485,009,472 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq950 91.5 1e-13 >seq950 Length=836093 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || ||||||||||| || ||||| ||||||||||| | ||| |||||| Sbjct 297705 ATGCAGATATTTGTCAAAACCTTGACAGGAAAAACCATTACTCTGGAAGTAGAGGCTTCT 297646 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 ||||| | | | || ||| ||||| || ||||||||| | || || ||| Sbjct 297645 GATACAATTGAGAACGTGAAAGCCAAGATCCAGGACAAAGAAGGCATTCCACCAGACCAG 297586 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| |||| || | ||| || || ||||||||||| | | ||| | | || || || Sbjct 297585 CAGCGACTGATCTTTGCTGGCAAGCAGCTGGAGGATGGCCGAACCCTCTCAGATTATAAT 297526 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTG 107765 || || || |||||||| | ||| | ||| Sbjct 297525 ATCCAGAAAGAGTCTACACTCCACCTTGTG 297496 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/191 (71%), Gaps = 1/191 (1%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || || |||||||| || ||||||||||| ||||| | ||| |||||| Sbjct 302150 ATGCAGATATTCGTCAAAACCTTGACAGGCAAAACGATTACTTTGGAAGTGGAGGCATCA 302091 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 ||||| | | | || ||| ||||| || || |||||| | || || ||| Sbjct 302090 GATACGATTGAGAATGTGAAAGCCAAGATCCAAGACAAGGAAGGCATTCCACCAGACCAG 302031 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| |||| || | ||| || || |||||||| || | | ||| || ||||||||||| Sbjct 302030 CAGCGACTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGAACTTTGTCGGACTACAAC 301971 Query 107736 ATTCA-AAAGG 107745 || || ||||| Sbjct 301970 ATCCAGAAAGG 301960 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398722881171118