Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zootermopsis_20nevadensis_20[genbank_20GCA_5F000696155.1_202014-06- 05] 31,662 sequences; 485,009,472 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq1127 291 6e-73 seq75 131 1e-24 seq1259 109 4e-18 seq85 104 2e-16 seq190 95.1 9e-14 seq1175 87.8 1e-11 >seq1127 Length=1068992 Score = 291 bits (322), Expect = 6e-73 Identities = 959/1471 (65%), Gaps = 31/1471 (2%) Strand=Plus/Plus Query 281426 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 281485 |||| |||||| | ||||||||||||||| | | |||||||| || | | || || Sbjct 1036120 GCAGACACATTCACAATACCATTGGCATCAATGTTGAATGTGACCTCTACCTTTGGCACA 1036179 Query 281486 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTA 281545 || | | || || || || ||| | ||| || ||||| || ||| || ||| | Sbjct 1036180 CCACGAGGTGCTGGAGGAATGCCTGTGAGATTGAAAGTTCCTAGGAGATTGTTGTCTCGA 1036239 Query 281546 GTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAA 281605 || | | ||| || || ||||| | || || || || ||| ||||| || ||||| Sbjct 1036240 GTCATTGCTCGCTCGCCTTCGAACACCTGTATGGTGACAGCAGGCTGATTGTCAGAATAC 1036299 Query 281606 GTTGTAAATACTCTG-GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGT 281664 ||||| || |||| | | | | ||||| || | ||| | || || ||||| || Sbjct 1036300 GTTGTGAA-GGTCTGCGTCTGTCTGCAAGGGATGCGAGAGTTACGTTCGATGATATTCGT 1036358 Query 281665 CATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAAT 281724 ||||| ||||||||||| || | |||||| ||||| || || ||||| || | | || Sbjct 1036359 CATAACTCCACCAGCTGTCTCGATACCAAGGGAAAGCGGCGTCACATCCACCAATAGAAC 1036418 Query 281725 ATTTTGAAGTTTTTCATC-AGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCAT 281783 || ||| | | | | | | || | ||| |||||||| ||||| | ||| || |||| Sbjct 1036419 ATCTTGGA-TCTGTGAGCTGGTGTCTCCACTCAGAATAGCAGCTTGCACAGCTGCCCCAT 1036477 Query 281784 ATGCAACAGCTTCATCAG----GATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAA 281839 |||| ||||| ||||||| ||| |||| ||| || | ||| ||| ||| | Sbjct 1036478 ATGCGACAGCCTCATCAGGGTTGATGGACAGGTTC----AGCTGTTTCCCACAGAAGTAG 1036533 Query 281840 TTTGAAAGAAGTTGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTC 281898 || ||| || | ||| | ||| ||||| |||| ||| || || |||| || | || Sbjct 1036534 TTCTGAAGCAGAT-TCTGGATCTTTGGAATTCGAGTTGAGCCACCCACTAGCACCACGTC 1036592 Query 281899 ATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAAC-GGGTTCA-AGA 281956 ||| | | || || || |||| ||| | ||||||| || |||| || | Sbjct 1036593 ATGTATCGACCCCTTGTCAAGCTTTGCATCTGTCAGTGCTTTTTCTACAGGGTGCAGTGT 1036652 Query 281957 CCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGAC--AT 282014 | | | ||| | || | ||||||||| || || ||||| | ||| | | || Sbjct 1036653 CGAACGGAAAAGA--TCAGCACAAAGTTCCTCAAACCGTGCTCT--TGAGACTTTCGAAT 1036708 Query 282015 TATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATA 282074 |||| || || || | ||| | ||||| |||||| | | | || ||||| | Sbjct 1036709 AGAAATCGATACCATCAACCAAGGCATCAATTTCAATGCTTGCCTCTGTACTGGAAGAAA 1036768 Query 282075 GTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATT--G 282132 | | || || || | ||| |||||| || |||| ||| || ||| ||| |||| Sbjct 1036769 GGGTTCGCTTTGCTCTCTCAGCTGCTGTTCTGAGTCGTCGCAATGCTCTTG--GATTCCC 1036826 Query 282133 ATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATT 282192 | | ||| | || | || |||||||| || ||| | | |||| || || || Sbjct 1036827 ACGTATGTCTTTCTTGAACTTCCTCTTGAACTCATCAGCCAAGTGGCTTACCAGTCGGTT 1036886 Query 282193 ATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAG--- 282249 |||||| |||||||| || | | |||| ||||| || || || || | ||||| Sbjct 1036887 ATCAAAGTCTTCACCACCAAGGTGGGTATCTCCTGCAGTTGCCCTAACCTCAAAAAGTGA 1036946 Query 282250 TCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAG 282309 ||| || |||| || | | | |||||| ||| || || |||| ||||| || || Sbjct 1036947 TCCTTCATCAATAGTAAGGATGGAGACATCAAAGGTACCGCCTCCCAGGTCAAAGATGAG 1037006 Query 282310 TACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGG 282369 |||||| |||| | |||| || || || ||||| || | |||||| || || || Sbjct 1037007 TACATTACGTTCTCCCTTGAGGTTCTTGTCTAGCCCATAGGCCAGAGCAGCGGCTGTGGG 1037066 Query 282370 TTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTG 282429 ||||| || || | | || || | || || || | || || ||||| || ||||| Sbjct 1037067 CTCATTGATGATGCGGAGCACGTTGATGCCTGCGATGGTACCCGCGTCTTTTGTAGCTTG 1037126 Query 282430 TCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCC 282489 | ||||| || || || || || || || || || || || || |||| || || Sbjct 1037127 ACGCTGTGAGTCATTGAAGTACGCTGGCACCGTGATTACAGCGTCGCGTACTGTGTTACC 1037186 Query 282490 AATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGG 282549 | |||| ||| || | | ||| ||| | | | ||| || || | |||||| Sbjct 1037187 CAGGAAAGCCTCTGCCGTCTCTCTCAACTTAGTCAGTACCATGGAGCTGATCTCTTCTGG 1037246 Query 282550 AG-AATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACAT 282608 | || |||| | | |||| | |||| ||| | | | || || | ||| Sbjct 1037247 TGCAAACTTGCGT-GTTTCACCCTTATATTGTACCTGGATTTTAGGCTTCCCGCAGTCAT 1037305 Query 282609 TAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTC 282668 | | ||| |||| ||||||| ||||| || ||||| ||| || | ||| || Sbjct 1037306 TTACCACTGTAAAAGGCCAATGCTTCATGTCACTTTGAATCTTTTCATCGTCAAAGCGTC 1037365 Query 282669 TACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATT 282728 |||| || | ||||| ||||| || | ||||| | ||||| | || | || | || Sbjct 1037366 TACCGATCAGCCGTTTCGCATCGAAGACTGTATTTTTGGGATTCATAGCCACCTGGTTTT 1037425 Query 282729 TGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGC 282788 | || || |||||||| ||| |||| | | | || | ||||| ||||| |||| Sbjct 1037426 TAGCGGCGTCTCCAATAAGACGTTCGGAGTAGTTGAAAGCCACATAGCTGGGAGTAGTGC 1037485 Query 282789 GATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAAC 282848 |||| |||||||| || ||||| || || || || || | |||||| ||||| || ||| Sbjct 1037486 GATTTCCTTGATCGTTTGCAATGATCTCGACCTTGCCTTGTTGCCAGACACCAACGCAAG 1037545 Query 282849 TAAAAGTTGTTCCTAAATCAATACCAATAGC 282879 | | || ||||| | ||||| || ||||| Sbjct 1037546 AATACGTGGTTCCAAGGTCAATTCCGATAGC 1037576 >seq75 Length=3442531 Score = 131 bits (144), Expect = 1e-24 Identities = 157/213 (74%), Gaps = 3/213 (1%) Strand=Plus/Minus Query 282268 AAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTC 282327 ||||| |||||| || |||||||||| |||||| | || |||||| |||| | | Sbjct 2938933 AAGAGAGACATCAAATGTGCCACCACCCAAATCAAACACCAGAACATTCTTTTC---GCC 2938877 Query 282328 TTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAA 282387 || | || || | |||||| |||| || ||||| |||||||||||||| ||||||| Sbjct 2938876 TTCCCTCTTGTCCAAACCATAAGCAATGGCTGCAGCCGTTGGTTCATTAATGATTCTCAT 2938817 Query 282388 AACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAA 282447 ||| ||| |||| ||| | || ||||| ||||| ||||||| || | ||| || || Sbjct 2938816 AACTACAAGTCCAGAGATTGTACCAGCATCCTTAGTTGCTTGTCGCTGAGCATCATTGAA 2938757 Query 282448 ATATGCAGGAACAGTAATAACGGCATCTGTTAC 282480 ||| ||||| || || | || |||| ||||| Sbjct 2938756 ATAAGCAGGTACTGTCACCACAGCATGAGTTAC 2938724 Score = 96.9 bits (106), Expect = 3e-14 Identities = 132/184 (72%), Gaps = 3/184 (2%) Strand=Plus/Minus Query 282665 TCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGA 282724 ||||| ||||| | ||||| |||||||| | ||| || |||||| ||| | ||| Sbjct 2937770 TCTCTGCCAATAAGACGTTTGGCATCAAACACAGTGTTTTCTGGATTTGCTGTAAGTTGG 2937711 Query 282725 TATTTGGCTGCATCTCCAATCAGATGTTCTGTCTC---TGTAAATGAAACATATGATGGA 282781 | |||||| ||||||||||||| || || ||| |||| |||||||| ||| Sbjct 2937710 TTTTTGGCAGCATCTCCAATCAACCTCTCACCTTCAGGTGTGAATGCCACATATGAAGGA 2937651 Query 282782 GTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCT 282841 || | | ||| || |||||||| ||||||||||| || |||||| | | ||||| Sbjct 2937650 GTAATTCTATTTCCCTGATCATTTGCAATAATTTCCACACGACCATTCTTATAGACACCA 2937591 Query 282842 ACAC 282845 |||| Sbjct 2937590 ACAC 2937587 >seq1259 Length=610742 Score = 109 bits (120), Expect = 4e-18 Identities = 116/153 (76%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 282727 TTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGT 282786 |||||| ||||| ||||| | |||| || || ||||| | ||||| ||| ||||| Sbjct 99819 TTTGGCAGCATCGCCAATTAATCGTTCCGTATCAGTAAAGGCCACATAACTTGGCGTTGT 99878 Query 282787 GCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACA 282846 ||||| ||||||||||| ||||||||||| ||||| |||| ||||||||| || ||||| Sbjct 99879 CCGATTCCCTTGATCATTTGCAATAATTTCCACTTTTCCATGTTGCCATACTCCGACACA 99938 Query 282847 ACTAAAAGTTGTTCCTAAATCAATACCAATAGC 282879 | || ||||| | ||| || || | ||| Sbjct 99939 GGAGTACGTAGTTCCAAGATCTATTCCTACAGC 99971 Score = 89.7 bits (98), Expect = 4e-12 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 281425 GGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGAC 281484 ||||| ||||| ||||| || || || ||||||||||| ||||| || |||| || || Sbjct 86437 GGCAGAAACATTCAGAATTCCGTTAGCGTCCAAATCAAAAGTGACCTCTATTTTTGGAAC 86496 Query 281485 CCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTT 281544 ||||| |||| || || || || ||||| || ||||||| |||||||||| Sbjct 86497 GCCTCTTGGAGCTGGAGGTATTCCAGTTAAATTGAAAGTTCCCAATAAATTATTATCTGC 86556 Query 281545 AGTGAATTTTCGTTCACCCTCGAA 281568 ||| | | ||||||||| || || Sbjct 86557 AGTCATTGCTCGTTCACCTTCAAA 86580 >seq85 Length=1587032 Score = 104 bits (114), Expect = 2e-16 Identities = 282/429 (66%), Gaps = 2/429 (0%) Strand=Plus/Minus Query 281411 GTTGATTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACT 281470 || || || || |||| || || || |||||||| || ||||| | ||| || || || Sbjct 1421720 GTCGACTTCTCTACGGCCGTTACGTTCAGAATACCGTTAGCATCGATATCGAAAGTCACC 1421661 Query 281471 TCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGA 281530 ||||| |||||||| |||| | | || || || || || | | ||| |||| || Sbjct 1421660 TCAATCTGAGGGACACCTCGCGGTGCGGGAGGAATTCCGGTGAGTTCAAACTTTCCGAGC 1421601 Query 281531 TTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTT 281590 || ||||| || || | |||||| |||||| | | ||||| || | | Sbjct 1421600 AGGTTGTTATCCTTGGTCATGGCTCGTTCGCCCTCGTATACCTGGATCAACACACCTGGC 1421541 Query 281591 TGATTATCTGAATAAGTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCT 281649 || |||||||| || || |||||| ||||| | | || || || |||||||| | Sbjct 1421540 TGGTTATCTGAGTAGGTAGTAAATG-TCTGGGTCTGCTTTGTGGGGATGGTTGTGTTACG 1421482 Query 281650 ATCAATAATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGAC 281709 | || | | ||||| | || |||||||| || | |||||||||||||||||| || Sbjct 1421481 CTTTATGAGGATAGTCATCACTCCTCCAGCTGTCTCAATACCAAGAGAAAGAGGAGTCAC 1421422 Query 281710 ATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTG 281769 || | || | | | |||| | || | | ||| | | || ||||| || Sbjct 1421421 GTCCAGCAGAAGCAGGTCCTGAACCTCCTCCGACTTGTCTCCAGCCAAGATTGCTGCCTG 1421362 Query 281770 AATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACC 281829 | ||| || ||||| || || || |||||||| || | | | || || | ||| || Sbjct 1421361 TACAGCCGCTCCATACGCCACTGCCTCATCAGGGTTGATCGACTTGTTCAGCTCTTTCCC 1421302 Query 281830 ATTGAAAAA 281838 ||||| || Sbjct 1421301 GTTGAAGAA 1421293 Score = 91.5 bits (100), Expect = 1e-12 Identities = 134/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 282690 CAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 282749 ||||||| || || | || || | || |||| | || || |||||||| |||| Sbjct 1419872 CAAAAATCGTGTTATTGGGGTTCATAGCCACTTGGTTCTTAGCCGCATCTCCGATCAATC 1419813 Query 282750 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 282809 |||||| ||||| || | ||||| || ||||| | || ||||| ||||| |||| Sbjct 1419812 TTTCTGTATCTGTGAAAGCTACATAACTAGGTGTTGTCCTGTTTCCTTGGTCATTAGCAA 1419753 Query 282810 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAA 282869 | |||||||| || |||| ||| | || || ||||| | ||||| || | ||||| Sbjct 1419752 TGATTTCAACCTTTCCATGTTGGAACACGCCAACACATGAGTAGGTTGTGCCAAGATCAA 1419693 Query 282870 TACCAATAGC 282879 |||||| ||| Sbjct 1419692 TACCAACAGC 1419683 >seq190 Length=1375728 Score = 95.1 bits (104), Expect = 9e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 400297 TGTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGCCTTAAT 400356 ||||| |||| | || || ||||| ||||| ||||| | ||| ||||||| ||| | Sbjct 355975 TGTACATTAATCCTCACTGAAGGAGACTCAGCCAAAACGCTGGCTGTGTCTGGTCTTGGT 356034 Query 400357 GTTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTAGG 400416 || |||| ||||| | |||||||| ||||||||| | || ||| | |||||||||||| Sbjct 356035 GTAGTTGGGAGAGACAAATATGGAGTGTTCCCACTTCGTGGTAAATTGTTGAATGTTAGG 356094 Query 400417 GATGC 400421 || || Sbjct 356095 GAGGC 356099 >seq1175 Length=632595 Score = 87.8 bits (96), Expect = 1e-11 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 282321 CTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAA 282380 |||| |||| ||||||| | ||||| || ||||| |||||||| ||||||||||| | Sbjct 455140 CTTTATCTTCTGTTTTATCCATGCCATAGGCTAAAGCTGCAGCAGTAGGTTCATTAATCA 455199 Query 282381 TTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGC 282426 | |||||||||||| || ||||| ||||||||||| || || Sbjct 455200 CACGCAAAACATTAAGTCCTGCAATCTGACCTGCATCTTTTGTAGC 455245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3739075929603612