Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zootermopsis_20nevadensis_20[genbank_20GCA_5F000696155.1_202014-06- 05] 31,662 sequences; 485,009,472 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq950 178 3e-39 seq623 163 6e-35 seq1183 152 1e-31 seq33 136 8e-27 seq70 132 9e-26 seq583 125 1e-23 seq394 111 3e-19 seq352 107 4e-18 >seq950 Length=836093 Score = 178 bits (196), Expect = 3e-39 Identities = 163/206 (79%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || || |||||||| ||||| |||||||||||||| || ||| || || || || || Sbjct 302176 TGAAGTGTAGATTCCTTCTGGATATTATAATCAGAGAGGGTTCGGCCATCCTCCAGCTGC 302235 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || ||||||||||| |||| || || ||||| || ||||||||||| ||||| ||||| Sbjct 302236 TTGCCAGCAAAGATCAGTCGCTGCTGGTCTGGTGGAATTCCTTCCTTGTCTTGGATCTTG 302295 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 ||||| ||||| |||||||||||| | ||| ||||| ||||| || |||||||| ||| Sbjct 302296 GCTTTCACATTCTCAATCGTATCAGATGCTTCCACTTCTAAAGTAATGGTCTTGCCAGTC 302355 Query 82788 AACGTCTTTACAAATATCTGCATTAT 82813 | || || || || |||||||| || Sbjct 302356 AGAGTTTTCACGAAAATCTGCATGAT 302381 Score = 170 bits (188), Expect = 4e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 ||||| | | ||| || || | ||| || ||||| |||||||| ||||||||||| || Sbjct 297479 CCTCCCCGGAGACGAAGCACAAGGTGGAGTGTAGACTCTTTCTGGATATTATAATCTGAG 297538 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || ||| || || || || || || ||||||||||| |||| || || ||||| || Sbjct 297539 AGGGTTCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATCAGTCGCTGCTGGTCTGGTGGA 297598 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || ||||| || || || ||||| ||||| || || ||||| |||||| || |||||| Sbjct 297599 ATGCCTTCTTTGTCCTGGATCTTGGCTTTCACGTTCTCAATTGTATCAGAAGCCTCTACT 297658 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| ||| || || || |||||||| || || |||||||||||||| Sbjct 297659 TCCAGAGTAATGGTTTTTCCTGTCAAGGTTTTGACAAATATCTGCAT 297705 Score = 163 bits (180), Expect = 6e-35 Identities = 159/204 (78%), Gaps = 3/204 (1%) Strand=Plus/Plus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || || || ||||||||||| | || ||||| || | | || || || || || Sbjct 300673 TGGAGTGTTGATTCTTTCTGGTTGTTGTAATCC---AGTGTGCGTCCATCCTCCAGCTGC 300729 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || ||||||||||| |||| |||||||| || || |||||||| || || |||||||| Sbjct 300730 TTGCCAGCAAAGATCAGTCGCTGTTGATCAGGTGGAATTCCTTCTTTGTCCTGAATCTTG 300789 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 ||||| ||||| |||||||||||| || ||||||||||| || || |||||||||||| Sbjct 300790 GCTTTAACATTCTCAATCGTATCAGAAGCCTCTACTTCCAATGTGATTGTCTTGCCTGTC 300849 Query 82788 AACGTCTTTACAAATATCTGCATT 82811 | ||||| ||||| ||||||||| Sbjct 300850 AGAGTCTTAACAAAGATCTGCATT 300873 Score = 158 bits (174), Expect = 2e-33 Identities = 149/190 (78%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 82621 CTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGA 82680 ||||||| || || || || || | | ||| || ||||| || || || |||||||||| Sbjct 301961 CTTTCTGGATGTTGTAGTCCGACAAAGTTCGGCCATCTTCCAGCTGCTTGCCAGCAAAGA 302020 Query 82681 TTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTT 82740 | |||| || || ||||| || || |||||||| ||||| ||||| ||||| ||||| | Sbjct 302021 TCAGTCGCTGCTGGTCTGGTGGAATGCCTTCCTTGTCTTGGATCTTGGCTTTCACATTCT 302080 Query 82741 CAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAA 82800 |||||||||| | || ||||||||||| ||||| ||||||||||| || || || | Sbjct 302081 CAATCGTATCTGATGCCTCCACTTCCAAAGTAATCGTTTTGCCTGTCAAGGTTTTGACGA 302140 Query 82801 ATATCTGCAT 82810 |||||||||| Sbjct 302141 ATATCTGCAT 302150 Score = 114 bits (126), Expect = 3e-20 Identities = 113/146 (77%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658 || || | ||| || |||||||| ||||| ||||||||||| || || ||| || || Sbjct 297722 AGGACGAGGTGAAGTGTAGATTCCTTCTGGATATTATAATCTGAGAGGGTTCGGCCATCC 297781 Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718 || || ||||| ||||||||||| |||| || || ||||| || |||||||| || || Sbjct 297782 TCCAGCTGTTTGCCAGCAAAGATCAGTCGCTGCTGGTCTGGTGGAATTCCTTCTTTGTCC 297841 Query 82719 TGAATCTTTGCTTTTACATTTTCAAT 82744 || ||||| ||||| || || ||||| Sbjct 297842 TGGATCTTGGCTTTCACGTTCTCAAT 297867 Score = 102 bits (112), Expect = 2e-16 Identities = 119/161 (74%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 ||||| | | ||| || || | ||| || ||||| |||||||| || || || || || Sbjct 298972 CCTCCCCGGAGACGAAGCACAAGGTGGAGTGTAGACTCTTTCTGGATGTTGTAGTCTGAC 299031 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 | | ||| || || || || || || ||||||||||| |||| || || ||||| || Sbjct 299032 AAAGTTCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATCAGTCGCTGCTGGTCTGGTGGA 299091 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAAT 82744 || |||||||| || || ||||| ||||| || || ||||| Sbjct 299092 ATGCCTTCCTTGTCCTGGATCTTGGCTTTCACGTTCTCAAT 299132 >seq623 Length=111817 Score = 163 bits (180), Expect = 6e-35 Identities = 173/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 ||| |||| | || ||||| || ||||| || ||||||||||| || || ||||| || Sbjct 107647 ACCACCTCGGAGGCGAAGAACCAAATGCAGGGTTGATTCTTTCTGGATGTTGTAATCTGA 107706 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 || | | || || || | ||| || ||||||||||| |||| || || | ||||| Sbjct 107707 TAAGGTACGGCCATCCTCCAATTGCTTGCCAGCAAAGATAAGTCGCTGCTGGCCAGGAGG 107766 Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762 || |||||||| || || ||||||||||| || || ||||| |||||| || ||||| Sbjct 107767 GATACCTTCCTTGTCCTGGATCTTTGCTTTCACGTTCTCAATGGTATCAGCTGGCTCTAC 107826 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| ||| || ||||| ||||||| ||||| ||||| |||||||| Sbjct 107827 CTCCAGAGTGATGGTCTTCCCTGTCAGGGTCTTCACAAAAATCTGCAT 107874 Score = 140 bits (154), Expect = 6e-28 Identities = 145/190 (76%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 82621 CTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGA 82680 ||||||||||||| || ||||| || | | ||| ||||| | || ||||| ||||| | Sbjct 110330 CTTTCTGTATATTGTAGTCAGAAAGTGTACGACCATCTTCCAACTGCTTTCCTGCAAAAA 110389 Query 82681 TTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTT 82740 ||| | ||||||||| ||||| ||||||||||| || ||||| |||||||| || |||| Sbjct 110390 TTAAACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCCTGAATTTTTGCTTTAACGTTTT 110449 Query 82741 CAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAA 82800 |||| || ||| | ||| ||||| | | | || || || || || | ||||| |||| Sbjct 110450 CAATGGTGTCAGACGTTTCCACTTCAAGAATAATGGTTTTTCCAGTGAGAGTCTTCACAA 110509 Query 82801 ATATCTGCAT 82810 | || ||||| Sbjct 110510 AGATTTGCAT 110519 >seq1183 Length=31732 Score = 152 bits (168), Expect = 1e-31 Identities = 171/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | || ||||| || ||||| || || ||||||||||| || || ||||| | Sbjct 15651 TACCACCACGCAGACGCAATACCAAGTGGAGGGTGGATTCTTTCTGGATGTTGTAATCTG 15710 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 ||| | | || ||||| | ||| || ||||||||||| |||| || || || || | Sbjct 15711 ATAAGGTGCGGCCATCTTCCAATTGCTTGCCAGCAAAGATAAGTCGCTGCTGCTCAGGGG 15770 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || |||||||| || || | |||| |||| ||| ||||| |||||| || |||| Sbjct 15771 GGATACCTTCCTTGTCCTGCAGCTTTTTCTTTAGATTCTCAATGGTATCAGCTGGCTCTA 15830 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | |||| ||| || ||||| ||||||| ||||| || || |||||||| Sbjct 15831 CCTCCAGAGTGATGGTCTTCCCTGTCAGGGTCTTCACGAAAATCTGCAT 15879 Score = 93.3 bits (102), Expect = 8e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 82621 CTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGA 82680 ||||||||||||| || ||||| || | | | | |||| | || ||||| ||||| Sbjct 17238 CTTTCTGTATATTGTAGTCAGAGAGTGTACGATCATCTTTCAACTGCTTTCCTGCAAAAT 17297 Query 82681 TTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTT 82740 ||| || ||||||||| | || ||||||||||| || | | | | ||| || |||| Sbjct 17298 TTAATCGTTGTTGATCAGAGGGAATTCCTTCCTTTTCCTCTAGATGTTGTTTCACGTTTT 17357 Query 82741 CAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAA 82800 |||| || || |||||| ||||| | ||| || || || || | || || |||| Sbjct 17358 CAATGGTGTCTGAAGGTTCAACTTCAAGAGTACAGGTTTTTCCAGTGAGAGTTTTCACAA 17417 Query 82801 ATATCTGCATT 82811 | || |||||| Sbjct 17418 AGATTTGCATT 17428 >seq33 Length=49811 Score = 136 bits (150), Expect = 8e-27 Identities = 135/174 (78%), Gaps = 3/174 (2%) Strand=Plus/Minus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || || || ||||||||||| | || ||||| || | | ||| ||| ||| || || Sbjct 15005 TGGAGTGTTGATTCTTTCTGGTTTTTGTAATCTGACAAAGTTCGACCATCT---AGATGC 14949 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || ||||||||||| |||| ||||| || || | |||||||||||||| |||||||| Sbjct 14948 TTGCCAGCAAAGATCAGTCGCTGTTGGTCCGGTTGAATTCCTTCCTTATCCCGAATCTTT 14889 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTG 82781 ||||||||||| ||||||||||| | ||| ||||||||||| || ||||| Sbjct 14888 GCTTTTACATTCTCAATCGTATCTGATGCTTCCACTTCCAAAGTAATGATCTTG 14835 >seq70 Length=429657 Score = 132 bits (146), Expect = 9e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 ||| |||| | || ||||| |||||||| || |||||||| || || || ||||| || Sbjct 142577 ACCACCTCGGAGGCGAAGAACCAAGTGCAGGGTTGATTCTTTATGGATGTTGTAATCTGA 142518 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 || | | || || || | ||| || |||||||| |||| | |||||||| ||||| Sbjct 142517 TAAGGTGCGGCCATCCTCCAATTGCTTGCCAGCAAAAATTAAACGTTGTTGATGAGGAGG 142458 Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762 ||||||||||| || ||||| ||| ||| | ||||||| || ||| ||||| || Sbjct 142457 AATTCCTTCCTTGTCCTGAATTTTTCGTTTCAAGTTTTCAACGGTGTCAGATGGTTCAAC 142398 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||| | ||| || || || || || | ||||| ||||| | ||||| Sbjct 142397 TTCAAGAGTAATGGTTTTTCCAGTGAGAGTCTTCACAAAGACTTGCAT 142350 >seq583 Length=527131 Score = 125 bits (138), Expect = 1e-23 Identities = 141/189 (75%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 82623 TTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATT 82682 ||||| ||||||||||| || | | | ||| ||||||| ||| || ||||||||||| Sbjct 233046 TTCTGAATATTATAATCCGACAACGTGCGACCATCTTCTAATTGCTTCCCAGCAAAGATC 232987 Query 82683 AGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCA 82742 | || ||||| || || || || ||||| |||||||||||||| || || |||||||| Sbjct 232986 AATCGCTGTTGGTCCGGTGGGATACCTTCTTTATCTTGAATCTTAGCCTTGACATTTTCT 232927 Query 82743 ATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAAT 82802 || ||||| | || ||||| | ||||| || || || || | || ||||| || Sbjct 232926 ATGGTATCCGACGCCTCAACTTCGAGGGTTATAGTTTTACCCGTTAGGGTTTTTACGAAA 232867 Query 82803 ATCTGCATT 82811 || |||||| Sbjct 232866 ATTTGCATT 232858 >seq394 Length=806705 Score = 111 bits (122), Expect = 3e-19 Identities = 100/126 (79%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 ||||| |||| || ||||||| ||| || |||||||| || || ||||||||||||||| Sbjct 96983 CCTCCCCTCAGGCGTAGAACTAGGTGAAGTGTAGATTCCTTTTGAATATTATAATCAGAT 96924 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 | ||| ||| ||||| ||||||||||||||||| || || | || ||||| || || Sbjct 96923 AATGTTCGACCATCTTCAAGTTGTTTTCCAGCAAAAATCAGGCGCTGCTGATCAGGGGGG 96864 Query 82704 ATTCCT 82709 || ||| Sbjct 96863 ATACCT 96858 >seq352 Length=269356 Score = 107 bits (118), Expect = 4e-18 Identities = 141/192 (73%), Gaps = 4/192 (2%) Strand=Plus/Plus Query 82621 CTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGA 82680 ||||||||||||| || ||||| | | | ||| ||||| | || ||||| ||||| | Sbjct 29305 CTTTCTGTATATTGTAGTCAGAAATTGTACGACCATCTTCCAACTGCTTTCCTGCAAAAA 29364 Query 82681 TTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATC-TTGAATCTTTGC-TTTTACATT 82738 ||| | ||||||||| || || ||||||||||| || |||| ||||| ||| || | Sbjct 29365 TTAAACGTTGTTGATCAGGGGGAATTCCTTCCTTGTCGTTGA--GTTTGCGTTTCACGTC 29422 Query 82739 TTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTAC 82798 |||||| || ||| | ||| ||||| | ||| | || || || || | ||||| || Sbjct 29423 TTCAATGGTGTCAAACGTTTCCACTTCAAGAGTAACGGTTTTTCCAGTGAGAGTCTTCAC 29482 Query 82799 AAATATCTGCAT 82810 ||| || ||||| Sbjct 29483 AAAGATTTGCAT 29494 Score = 100 bits (110), Expect = 6e-16 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 82671 CCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCT 82730 ||||||||||| |||| || || || || ||||| || ||||| || || | |||| Sbjct 26147 CCAGCAAAGATAAGTCGCTGCTGGTCAGGGGGTATGCCCTCCTTGTCCTGCAGCTTTTTC 26206 Query 82731 TTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAAC 82790 |||||| ||||| |||||| | ||||| |||| ||| || ||||| ||||||| Sbjct 26207 TTTACAGCCTCAATGGTATCAGCTGTCTCTACCTCCAGAGTGATGGTCTTCCCTGTCAGG 26266 Query 82791 GTCTTTACAAATATCTGCAT 82810 ||||| ||||| |||||||| Sbjct 26267 GTCTTCACAAAAATCTGCAT 26286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981428902773418