Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zootermopsis_20nevadensis_20[genbank_20GCA_5F000696155.1_202014-06- 05] 31,662 sequences; 485,009,472 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq950 86.0 1e-11 >seq950 Length=836093 Score = 86.0 bits (94), Expect = 1e-11 Identities = 103/139 (74%), Gaps = 11/139 (8%) Strand=Plus/Plus Query 81644 AGAGTAAATTCCTTCTGTATATTATAATCAGATAGAGTT--------CTACAG--TCTT- 81692 || ||| |||||||||| |||||||||||||| || ||| || ||| ||| Sbjct 302179 AGTGTAGATTCCTTCTGGATATTATAATCAGAGAGGGTTCGGCCATCCTCCAGCTGCTTG 302238 Query 81693 CTAACAAAGATTAGTCTTTGTTGACCTGGAAGTATTTCTTCCTTATCTTGAATCTTTGCT 81752 | | ||||||| |||| || || |||| | ||| ||||||| ||||| ||||| ||| Sbjct 302239 CCAGCAAAGATCAGTCGCTGCTGGTCTGGTGGAATTCCTTCCTTGTCTTGGATCTTGGCT 302298 Query 81753 TTTATATTTTCAATCGTAT 81771 || | ||| |||||||||| Sbjct 302299 TTCACATTCTCAATCGTAT 302317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903053652432320