Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zootermopsis_20nevadensis_20[genbank_20GCA_5F000696155.1_202014-06- 05] 31,662 sequences; 485,009,472 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq1183 111 2e-19 seq950 111 2e-19 seq623 107 2e-18 >seq1183 Length=31732 Score = 111 bits (122), Expect = 2e-19 Identities = 151/208 (73%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | |||||| |||||||| || |||||||| | ||| | | | || || | Sbjct 15674 AAGTGGAGGGTGGATTCTTTCTGGATGTTGTAATCTGATAAGGTGCGGCCA-TCTTCCAA 15732 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 |||||||| || | || || |||||||| || || ||||| ||||||||||| | Sbjct 15733 TTGCTTGCCAGCAAAGATAAGTCGCTGCTGCTCAGGGGGGATACCTTCCTTGTCCTGCAG 15792 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||||| ||| || | ||||| || || | ||||| || || | |||| ||| || || Sbjct 15793 CTTTTTCTTTAGATTCTCAATGGTATCAGCTGGCTCTACCTCCAGAGTGATGGTCTTCCC 15852 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATG 133661 ||||| || || ||||||||||||||| Sbjct 15853 TGTCAGGGTCTTCACGAAAATCTGCATG 15880 Score = 96.9 bits (106), Expect = 3e-15 Identities = 147/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||| || ||||||| || |||||||| | ||| | | | || || | Sbjct 15446 AAGTGCAGGGTTGATCCTTTCTGGATGTTGTAATCTGATAAGGTGCGGCCA-TCTTCCAA 15504 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 |||||||| || | || || |||||||| || || ||||| ||||||||||| | Sbjct 15505 TTGCTTGCCAGCAAACATAAGTCGCTGCTGCTCAGGGGGGATACCTTCCTTGTCCTGCAG 15564 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||||| ||| || | ||||| || || | ||||| || || | |||| ||| || || Sbjct 15565 CTTTTTCTTTAGATTCTCAATGGTATCAGCTGGCTCTACCTCCAGAGTGATGGTCTTCCC 15624 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||||| || || || ||||||||||| Sbjct 15625 TGTCAGGGTCTTCACAAAAATCTGCAT 15651 >seq950 Length=836093 Score = 111 bits (122), Expect = 2e-19 Identities = 118/156 (76%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||| ||||||||||| || | || || ||||||||||| || || || ||||||||| Sbjct 302224 TCCTCCAGCTGCTTGCCAGCAAAGATCAGTCGCTGCTGGTCTGGTGGAATTCCTTCCTTG 302283 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| || | | ||||| ||| || | | ||||| || | || | | Sbjct 302284 TCTTGGATCTTGGCTTTCACATTCTCAATCGTATCAGATGCTTCCACTTCTAAAGTAATG 302343 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCATG 133661 || ||||| ||||||||||| ||||||||||||||| Sbjct 302344 GTCTTGCCAGTCAGAGTTTTCACGAAAATCTGCATG 302379 Score = 102 bits (112), Expect = 8e-17 Identities = 116/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 || || ||||||||||| || | || || ||||||||||| || || |||||||||||| Sbjct 301996 TCTTCCAGCTGCTTGCCAGCAAAGATCAGTCGCTGCTGGTCTGGTGGAATGCCTTCCTTG 302055 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| || | | ||||| ||| || | | |||||| || | || | Sbjct 302056 TCTTGGATCTTGGCTTTCACATTCTCAATCGTATCTGATGCCTCCACTTCCAAAGTAATC 302115 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCATG 133661 |||||||| |||| ||||| ||||| ||||||||| Sbjct 302116 GTTTTGCCTGTCAAGGTTTTGACGAATATCTGCATG 302151 Score = 95.1 bits (104), Expect = 1e-14 Identities = 142/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||||||||| ||||| ||||| | || | | | ||||| ||||||||||| Sbjct 297509 GTAGACTCTTTCTGGATATTATAATCTGAGAGGGTTCGGCCA-TCCTCCAGCTGCTTGCC 297567 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || || ||||||||||| || || |||||||| ||||| |||||| || Sbjct 297568 AGCAAAGATCAGTCGCTGCTGGTCTGGTGGAATGCCTTCTTTGTCCTGGATCTTGGCTTT 297627 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | ||||| || || | | ||| || || | || | |||||| || |||| || Sbjct 297628 CACGTTCTCAATTGTATCAGAAGCCTCTACTTCCAGAGTAATGGTTTTTCCTGTCAAGGT 297687 Query 133643 TTTTACGAAAATCTGCATG 133661 ||| || || ||||||||| Sbjct 297688 TTTGACAAATATCTGCATG 297706 Score = 86.0 bits (94), Expect = 6e-12 Identities = 142/199 (71%), Gaps = 7/199 (4%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || |||||||| | |||||||| || ||| | | | ||||| ||||||||||| Sbjct 300679 GTTGATTCTTTCTGGTTGTTGTAATC---CAGTGTGCGTCCA-TCCTCCAGCTGCTTGCC 300734 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || || ||||| || || || || || ||||| ||||| ||| || |||| Sbjct 300735 AGCAAAGATCAGTCGCTGTTGATCAGGTGGAATTCCTTCTTTGTC-CTGAATCTTGGCTT 300793 Query 133583 GAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | ||||| ||| || | | ||| || || | |||| || ||||| ||||||| Sbjct 300794 TAACATTCTCAATCGTATCAGAAGCCTCTACTTCCAATGTGATTGTCTTGCCTGTCAGAG 300853 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || || || |||||||| Sbjct 300854 TCTTAACAAAGATCTGCAT 300872 >seq623 Length=111817 Score = 107 bits (118), Expect = 2e-18 Identities = 150/208 (72%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||| | ||| || |||||||| || |||||||| | || | | | ||||| | Sbjct 107669 AAATGCAGGGTTGATTCTTTCTGGATGTTGTAATCTGATAAGGTACGGCCA-TCCTCCAA 107727 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 |||||||| || | || || ||||||||| | |||||||| ||||||||||| ||| Sbjct 107728 TTGCTTGCCAGCAAAGATAAGTCGCTGCTGGCCAGGAGGGATACCTTCCTTGTCCTGGAT 107787 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 |||| || | | ||||| || || | ||||| || || | |||| ||| || || Sbjct 107788 CTTTGCTTTCACGTTCTCAATGGTATCAGCTGGCTCTACCTCCAGAGTGATGGTCTTCCC 107847 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATG 133661 ||||| || || || |||||||||||| Sbjct 107848 TGTCAGGGTCTTCACAAAAATCTGCATG 107875 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483229474132880