Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zootermopsis_20nevadensis_20[genbank_20GCA_5F000696155.1_202014-06- 05] 31,662 sequences; 485,009,472 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq623 114 1e-20 seq70 107 2e-18 seq583 105 7e-18 seq950 104 2e-17 seq352 98.7 1e-15 seq95 82.4 8e-11 >seq623 Length=111817 Score = 114 bits (126), Expect = 1e-20 Identities = 143/192 (74%), Gaps = 3/192 (2%) Strand=Plus/Plus Query 134524 CCTTT-TGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAA 134582 ||||| || || |||||||| || || || || || | ||| || ||||||||| Sbjct 110329 CCTTTCTGTATATTGTAGTCAGAAAGTGTACGACCATCTTCCAACTGCTTTCCTGCAAAA 110388 Query 134583 ATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCG 134642 || ||||| || ||||| || || || ||||| || || |||| |||||| || | || Sbjct 110389 ATTAAACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCCTGAA-TTTTTGCTTTAACGTT 110447 Query 134643 TCCAAT-GTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAAC 134701 | |||| ||||| |||| |||||| || ||| |||||||||| || || | ||| || || Sbjct 110448 TTCAATGGTGTCAGACGTTTCCACTTCAAGAATAATGGTTTTTCCAGTGAGAGTCTTCAC 110507 Query 134702 GAAAATTTGCAT 134713 || |||||||| Sbjct 110508 AAAGATTTGCAT 110519 >seq70 Length=429657 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || |||| ||| || | || | ||| || || ||||| || || |||||||| || Sbjct 142576 CCACCTCGGAGGCGAAGAACCAAGTGCAGGGTTGATTCTTTATGGATGTTGTAATCTGAT 142517 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || || | || ||||| |||||||| ||||| || |||| || || Sbjct 142516 AAGGTGCGGCCATCCTCCAATTGCTTGCCAGCAAAAATTAAACGTTGTTGATGAGGAGGA 142457 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || || ||||||||| |||| | || | ||||| || | ||| || Sbjct 142456 ATTCCTTCCTTGTCCTGAATTTTTCGTTTCAAGTTTTCAACGGTGTCAGATGGTTCAACT 142397 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || |||||||||||||| || || | ||| || || || | |||||| Sbjct 142396 TCAAGAGTAATGGTTTTTCCAGTGAGAGTCTTCACAAAGACTTGCAT 142350 >seq583 Length=527131 Score = 105 bits (116), Expect = 7e-18 Identities = 140/192 (73%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 134524 CCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAA 134582 |||| ||||| || || || | ||||| || || || || | || || || ||||| Sbjct 233048 CCTTCTGAATATTATAATCCGACAACG-TGCGACCATCTTCTAATTGCTTCCCAGCAAAG 232990 Query 134583 ATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCG 134642 ||||| ||||| || || || || || |||||||| |||||||| || ||||| Sbjct 232989 ATCAATCGCTGTTGGTCCGGTGGGATACCTTCTTTATCTTGAATCTTAGCCTTGACATTT 232930 Query 134643 TCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACG 134702 || | || || |||| || || ||||| || || |||||||| |||| ||||| ||| Sbjct 232929 TCTATGGTATCCGACGCCTCAACTTCGAGGGTTATAGTTTTACCCGTTAGGGTTTTTACG 232870 Query 134703 AAAATTTGCATT 134714 |||||||||||| Sbjct 232869 AAAATTTGCATT 232858 >seq950 Length=836093 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| | ||| || | ||| ||||| || || || || || || || || || || Sbjct 297479 CCTCCCCGGAGACGAAGCACAAGGTGGAGTGTAGACTCTTTCTGGATATTATAATCTGAG 297538 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || || ||||| ||||| ||||| |||| |||||||| || || || Sbjct 297539 AGGGTTCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATCAGTCGCTGCTGGTCTGGTGGA 297598 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||||||||| || || || || ||| || || | ||| || || | || || Sbjct 297599 ATGCCTTCTTTGTCCTGGATCTTGGCTTTCACGTTCTCAATTGTATCAGAAGCCTCTACT 297658 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || |||||||||||||| || || || ||||| || || || ||||| Sbjct 297659 TCCAGAGTAATGGTTTTTCCTGTCAAGGTTTTGACAAATATCTGCAT 297705 Score = 82.4 bits (90), Expect = 8e-11 Identities = 106/144 (74%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 ||||| | ||| || | ||| ||||| || || || || || || ||||||||||| | | Sbjct 298972 CCTCCCCGGAGACGAAGCACAAGGTGGAGTGTAGACTCTTTCTGGATGTTGTAGTCTGAC 299031 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | | | | || || ||||| ||||| ||||| |||| |||||||| || || || Sbjct 299032 AAAGTTCGGCCA-TCCTCCAGCTGCTTGCCAGCAAAGATCAGTCGCTGCTGGTCTGGTGG 299090 Query 134606 TATGCCTTCTTTTTCTTGAATTTT 134629 |||||||| || || || || || Sbjct 299091 AATGCCTTCCTTGTCCTGGATCTT 299114 >seq352 Length=269356 Score = 98.7 bits (108), Expect = 1e-15 Identities = 137/191 (72%), Gaps = 1/191 (1%) Strand=Plus/Plus Query 134524 CCTTT-TGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAA 134582 ||||| || || |||||||| || || || || || | ||| || ||||||||| Sbjct 29304 CCTTTCTGTATATTGTAGTCAGAAATTGTACGACCATCTTCCAACTGCTTTCCTGCAAAA 29363 Query 134583 ATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCG 134642 || ||||| || ||||| || || || ||||| || || | | ||| |||| || | Sbjct 29364 ATTAAACGTTGTTGATCAGGGGGAATTCCTTCCTTGTCGTTGAGTTTGCGTTTCACGTCT 29423 Query 134643 TCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACG 134702 || | ||||| ||| |||||| || ||||||| |||||| || || | ||| || || Sbjct 29424 TCAATGGTGTCAAACGTTTCCACTTCAAGAGTAACGGTTTTTCCAGTGAGAGTCTTCACA 29483 Query 134703 AAAATTTGCAT 134713 || |||||||| Sbjct 29484 AAGATTTGCAT 29494 >seq95 Length=16868 Score = 82.4 bits (90), Expect = 8e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 8755 ATATTGCAATACGACATGTGGAATGTCACGCCCACCTCTTTGTGGAATTGGAGCGATTTG 8814 ||| | || |||||||||||| |||| ||| || ||||| ||| | ||| || || Sbjct 3967 ATACTTCAGTACGACATGTGGGATGTTGAGCCTACGTCTTTATGGGACTGGGCAGACCTG 3908 Query 8815 AAACGCAAAATTGCTCAATTCGGTTTGCGCAATTCGCTGTTGGTGGCTTACATGCCCACC 8874 ||||| ||||| || ||| | | ||| ||||| || | || ||||| || Sbjct 3907 AAACGTCGTATTGCGAAACACGGCGTTCACAACTCGCTTTTACTCGCGCCAATGCCGACA 3848 Query 8875 GCCACGACTGCTCAAATAATGGGAAACAACGAATCCTTTGAGCCGTTCACCAACAACGTG 8934 || | || |||||||| | ||||||||||| || ||||| |||| || | || | Sbjct 3847 GCTTCAACGGCTCAAATCCTTGGAAACAACGAGTCATTTGAACCGTATACAACAAATATC 3788 Query 8935 TACGTGAGACGAGTGTTGGCCGGCGATTTT 8964 ||| ||||| ||| || |||| || ||| Sbjct 3787 TACACTAGACGTGTGCTGTCCGGAGAGTTT 3758 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505198375948240