Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zootermopsis_20nevadensis_20[genbank_20GCA_5F000696155.1_202014-06- 05] 31,662 sequences; 485,009,472 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq513 150 2e-31 seq95 118 1e-21 >seq513 Length=652068 Score = 150 bits (166), Expect = 2e-31 Identities = 149/193 (77%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 39887 TATGTATCTATTAACAGACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAAT 39946 || ||||| || |||| ||||||||||||||||||| ||||| ||||| |||||||| Sbjct 207377 TAGGTATCAATCAACAAGCTATACATTTCTGAATGGACATTTTCCATCGCTATCTGAAAG 207436 Query 39947 CCGTAAAAACATCTTGCTTCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTT 40006 || || || ||||||||||| || | |||||| || | ||||| || ||||||| Sbjct 207437 CCATAGAAGCATCTTGCTTCTGTTACTTGTACTTCCTGGCTGAATCTCTCTACCAAATTC 207496 Query 40007 TCATTCACTATTCCATCACTAGCGGCAAAAAATGCCAATACATGTTTAATAAAATATTTT 40066 ||||| || |||||||| ||| ||||||||||| | |||||| ||||||| | || Sbjct 207497 TCATTAACAATTCCATCTGAAGCTGCAAAAAATGCTAGTACATGGGAGATAAAATGTCTT 207556 Query 40067 TCATCGGGTGTCA 40079 ||||| ||||| Sbjct 207557 TCATCTTCTGTCA 207569 Score = 98.7 bits (108), Expect = 1e-15 Identities = 98/127 (77%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 40103 TTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGTTC 40162 || |||| ||| |||||||| || ||||||||||| || |||||||| |||||||| | | Sbjct 207894 TTGGATAAATCCACTTCTTCCGCAGTCCAAAACGAAGCTTCTGCCTTCTTGTACATTTGC 207953 Query 40163 CATATATCACGATATTGTATTGGAAAAATAACAAATCTATTTGGATTTTTTGCAAGGATG 40222 ||||| || ||||||| || || || || ||||||| |||| || | | || | | Sbjct 207954 CATATGTCGTGATATTGGATGGGGAAGATTACAAATCGTCTTGGGTTCTCTCTTAGTAGG 208013 Query 40223 GGTTCCA 40229 ||||||| Sbjct 208014 GGTTCCA 208020 >seq95 Length=16868 Score = 118 bits (130), Expect = 1e-21 Identities = 138/184 (75%), Gaps = 2/184 (1%) Strand=Plus/Plus Query 69546 TCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCAT 69605 ||||||||| ||| |||||||||| ||||| || | | ||| ||||| ||||| Sbjct 6593 TCCAGGACAAGCATGCGGACACATCAGACTCCACATCTCGTTGTTCTTCACTCGCTTCAT 6652 Query 69606 AAATAGATCGGGAATCCAAAGAGCTATA-AAGAGATCTCTGGTTCTATTTTCTTCATTTC 69664 ||||||||| |||||||| ||||| ||| || ||||| | | || | |||| || || | Sbjct 6653 AAATAGATCAGGAATCCACAGAGC-ATAGAAAAGATCCCGAGCTCGAATTTCCTCTTTCC 6711 Query 69665 CTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATA 69724 | || ||||| || || || |||||||| | | ||| | |||||| ||||| ||||| | Sbjct 6712 CCGTGTTTTTCTTCAGGTCAAGAAACTCAAACACATCTGCATGCCAGGGTTCCAGATAAA 6771 Query 69725 TCGC 69728 | || Sbjct 6772 TGGC 6775 Score = 89.7 bits (98), Expect = 7e-13 Identities = 106/141 (75%), Gaps = 2/141 (1%) Strand=Plus/Plus Query 68980 TCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTA 69039 || || ||||||||||||||||| || || ||||| ||||| || || || |||| || | Sbjct 4459 TCGGCAAGTTCACAACTTGCCTCCAAAGCCCCGTAGTAAATAGTCTCAAATATCTGCTGA 4518 Query 69040 TTGAGATCTTGTGCTTCTAGACTATCGAATGGATAATGTAAAAGA-ATAAATGCATCTGC 69098 || || | ||||| ||| ||| || ||||| |||| | || | || || |||||||| Sbjct 4519 TTTAGCTTCTGTGCCTCTTCACTGTCAAATGG-TAATCTCAAGCAGATGAACGCATCTGC 4577 Query 69099 CAATCCCTGAACCCCAATACC 69119 ||| || || | ||||| || Sbjct 4578 CAAACCTTGTATGCCAATGCC 4598 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686636938669680