Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zootermopsis_20nevadensis_20[genbank_20GCA_5F000696155.1_202014-06- 05] 31,662 sequences; 485,009,472 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq124 114 1e-20 seq513 89.7 4e-13 >seq124 Length=507148 Score = 114 bits (126), Expect = 1e-20 Identities = 232/341 (68%), Gaps = 4/341 (1%) Strand=Plus/Plus Query 40865 AGGTGATCTTGGTCCTGTTTATGGATTTCAGTCGCGACATTTTGGAGCAAAAT--ATGAC 40922 ||| || ||||||||||| ||||||||||||| ||| |||||||| || |||| ||| Sbjct 494400 AGGAGACCTTGGTCCTGTGTATGGATTTCAGTGGCGTCATTTTGGGGCCAAATACATG-G 494458 Query 40923 ACTATGTACTCTGATTATACCAATAAAGGAATGGATCAATTACAGTGCGTTATAGATACG 40982 || ||| | |||| ||| | | |||| | |||||||| ||| || || | || Sbjct 494459 AC-ATGAATACTGACTATTCTGGTCAAGGTGTTGATCAATTGCAGCAAGTAATCAACACA 494517 Query 40983 ATTAAATCCGATCCCGATAGCCGACGTATAATATTGTGCGCGTGGAACCCAACGGACGTA 41042 | ||||| | || || || || || || |||| | ||||| | | || || Sbjct 494518 CTGAAATCTAAACCATATGATCGTCGCATGATCATGTGTTCATGGAATGCCATTGATATA 494577 Query 41043 CATTTGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTGCAATGGTGAA 41102 | ||||| | ||||| ||||| | | ||| || || ||| | | |||| Sbjct 494578 CCAAAAATGGCTCTTCCACCATGTCACTGCCTTGTTCAATTCTATGTTGCTGAAGATGAA 494637 Query 41103 CTGTCATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATA 41162 |||| || || ||||||| | |||| |||||||| || || || || |||||||| Sbjct 494638 CTGTACTGCCAGCTGTATCAGCGTTCAGCAGACATGGGCCTTGGAGTACCATTTAACATT 494697 Query 41163 GCGAGTTATGCTCTGCTCACGTATATGATTGCACACGTTAC 41203 || |||||||| || | || || ||| ||||| | ||||| Sbjct 494698 GCTAGTTATGCATTGTTAACATACATGGTTGCAAAGGTTAC 494738 >seq513 Length=652068 Score = 89.7 bits (98), Expect = 4e-13 Identities = 73/89 (82%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 43700 TTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCG 43759 ||||| | || || || |||||||| |||||||||||||||||||| || ||| | || Sbjct 207988 TTTGTAATCTTCCCCATCCAATATCACGACATATGGCAAATGTACAAGAAGGCAGAAGCT 207929 Query 43760 TCATTTTGGACAGCAGAAGAAGTTGATTT 43788 || |||||||| || |||||||| ||||| Sbjct 207928 TCGTTTTGGACTGCGGAAGAAGTGGATTT 207900 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397302629430310