Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zootermopsis_20nevadensis_20[genbank_20GCA_5F000696155.1_202014-06- 05] 31,662 sequences; 485,009,472 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq352 86.0 5e-12 >seq352 Length=269356 Score = 86.0 bits (94), Expect = 5e-12 Identities = 133/190 (70%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 27058 CTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAA 27117 |||| || ||||||||||| || | || | ||||| | ||| || || || ||| Sbjct 29305 CTTTCTGTATATTGTAGTCAGAAATTGTACGACCATCTTCCAACTGCTTTCCTGCAAAAA 29364 Query 27118 TGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTT 27177 | | ||| |||||||| || || | || || || ||| || ||| ||||| | || Sbjct 29365 TTAAACGTTGTTGATCAGGGGGAATTCCTTCCTTGTCGTTGAGTTTGCGTTTCACGTCTT 29424 Query 27178 CTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAA 27237 | | ||||| | ||| ||||| ||||| | | ||| || || ||||| ||||||| Sbjct 29425 CAATGGTGTCAAACGTTTCCACTTCAAGAGTAACGGTTTTTCCAGTGAGAGTCTTCACAA 29484 Query 27238 AGATTTGCAT 27247 |||||||||| Sbjct 29485 AGATTTGCAT 29494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424770426048144