Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zootermopsis_20nevadensis_20[genbank_20GCA_5F000696155.1_202014-06- 05] 31,662 sequences; 485,009,472 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq513 87.8 2e-12 >seq513 Length=652068 Score = 87.8 bits (96), Expect = 2e-12 Identities = 143/201 (71%), Gaps = 4/201 (2%) Strand=Plus/Minus Query 94738 CCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGCGTTC 94796 |||||| | ||||||| || |||||||| | ||||| | | || || ||| | Sbjct 206744 CCGTGTGTGAAAAAGAAGGCAGATTGGGCCCTTCAGTGGATAGCGCACGAAACTGCGA-C 206686 Query 94797 CTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTT 94856 |||| |||| || | | || ||||| || || ||||||||||||||||| || Sbjct 206685 GTTTGGTGAGAGAGTGGTTGCGTTTGCTGCAGTGGAAGGTATCTTCTTCTCTGG-AAGTT 206627 Query 94857 CTGC-GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACG 94915 ||| ||||| | ||| | |||||||| || || ||||| |||||| |||| ||| | Sbjct 206626 TTGCTGCTATCTTCTGGTTAAAGAAGCGGGGACTTATGCCCGGTCTCACCTTCAGCAATG 206567 Query 94916 AGCTTATCTCTCGTGACGAGG 94936 | ||||| || || ||||||| Sbjct 206566 AACTTATTTCACGAGACGAGG 206546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583029959956880