Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zootermopsis_20nevadensis_20[genbank_20GCA_5F000696155.1_202014-06- 05] 31,662 sequences; 485,009,472 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq124 91.5 1e-13 >seq124 Length=507148 Score = 91.5 bits (100), Expect = 1e-13 Identities = 76/93 (82%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 112197 TAACTCTCTTGCATTTGTGGATCCTCTAATAAACCATAGCAATTCTTCCACAACCCCTTT 112256 || |||| | ||||||||||| |||||||| |||||||||| ||||||||| || | Sbjct 493356 TAGCTCTTTGGCATTTGTGGAGCCTCTAATGAACCATAGCAGTTCTTCCACTACTGCACG 493297 Query 112257 CCAGTACACTCTTTTAGTAGTTAGCAGTGGAAA 112289 |||| ||||||| || ||||| || |||||||| Sbjct 493296 CCAGAACACTCTCTTGGTAGTGAGAAGTGGAAA 493264 Score = 86.0 bits (94), Expect = 5e-12 Identities = 224/334 (67%), Gaps = 11/334 (3%) Strand=Plus/Minus Query 111789 TGCAATCATGTATGTGAGTAGACTG--TAACTAGCAATGTTAAATGGCACACCTAGGCCC 111846 ||||| ||||||||| | | | || |||||||||||||||||||| || || |||||| Sbjct 494730 TGCAACCATGTATGTTA--ACAATGCATAACTAGCAATGTTAAATGGTACTCCAAGGCCC 494673 Query 111847 ATATCTCCCGATCTTTGATATAGCTGACATGATAGTTTATTTTGTGACACATAAAATTGA 111906 || ||| | || | ||||| ||||| || | |||| || || | ||||| |||||| Sbjct 494672 ATGTCTGCTGAACGCTGATACAGCTGGCAGTACAGTTCATCTTCAGCAACATAGAATTGA 494613 Query 111907 CAAAGTACATGACAAGGAGGCAATGCCATCCCATTCAT---AAAGGGTCCCCATGCACAC 111963 ||| ||||| || || | ||||| || || || ||||| |||| Sbjct 494612 ACAAGGCAGTGACATGGTGGAAGAGCCATTTTTGGTATATCAATGGCATTCCATGAACAC 494553 Query 111964 ATGATCATCCTTCTGCTGTAGCGATTA-TGTTCAATGTCGTGTATGACATTCAAGAGCTG 112022 |||||||| | | || | ||| |||| ||| || || || | | | || Sbjct 494552 ATGATCATGCGACGATCATATGGTTTAGATTTCAGTGT-GTTGATTACTTGCTGCAATTG 494494 Query 112023 GTCTATCCCTTTACCAGTATAATCCG-CCTGACATCCAGTGTATGTTGCCCCATAGTGTC 112081 || | |||| ||||| ||| || | | | |||| ||||| | |||||| | || | Sbjct 494493 ATCAACACCTTGACCAGAATAGTCAGTATTCATGTCCA-TGTATTTGGCCCCAAAATGAC 494435 Query 112082 TCCATTGGAATCCATAAATAGGCCCCAGATCTCC 112115 ||| || |||||||| | ||| || || ||||| Sbjct 494434 GCCACTGAAATCCATACACAGGACCAAGGTCTCC 494401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391794355786906