Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zootermopsis_20nevadensis_20[genbank_20GCA_5F000696155.1_202014-06- 05] 31,662 sequences; 485,009,472 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq513 82.4 8e-11 >seq513 Length=652068 Score = 82.4 bits (90), Expect = 8e-11 Identities = 95/123 (77%), Gaps = 4/123 (3%) Strand=Plus/Minus Query 59991 GCTTTTGCATGC-GTGGAAGGAATCTTCTTCTCTGGCTCGTTCTG-TGCTATTTTCTGGC 60048 || ||||| ||| |||||||| |||||||||||||| ||| || |||||| |||||| Sbjct 206666 GCGTTTGC-TGCAGTGGAAGGTATCTTCTTCTCTGG-AAGTTTTGCTGCTATCTTCTGGT 206609 Query 60049 TCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACG 60108 | || ||||| || || ||||| || || | ||| ||| || || ||||| || |||| Sbjct 206608 TAAAGAAGCGGGGACTTATGCCCGGTCTCACCTTCAGCAATGAACTTATTTCACGAGACG 206549 Query 60109 AGG 60111 ||| Sbjct 206548 AGG 206546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548307707597280