Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zootermopsis_20nevadensis_20[genbank_20GCA_5F000696155.1_202014-06- 05] 31,662 sequences; 485,009,472 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq124 98.7 9e-16 >seq124 Length=507148 Score = 98.7 bits (108), Expect = 9e-16 Identities = 216/324 (67%), Gaps = 0/324 (0%) Strand=Plus/Plus Query 34394 GGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGGG 34453 || ||| | || || || || || || |||||| | || |||||||| | || || Sbjct 494401 GGAGACCTTGGTCCTGTGTATGGATTTCAGTGGCGTCATTTTGGGGCCAAATACATGGAC 494460 Query 34454 AGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGACACCTTG 34513 | | | |||||||| || || || | || || ||||| | || ||| |||| || Sbjct 494461 ATGAATACTGACTATTCTGGTCAAGGTGTTGATCAATTGCAGCAAGTAATCAACACACTG 494520 Query 34514 AAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCT 34573 || || || |||| | | || | ||||| | ||||| | | ||| | || Sbjct 494521 AAATCTAAACCATATGATCGTCGCATGATCATGTGTTCATGGAATGCCATTGATATACCA 494580 Query 34574 CTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTG 34633 ||||| || || || || ||| ||| |||||||| || || | | || ||| Sbjct 494581 AAAATGGCTCTTCCACCATGTCACTGCCTTGTTCAATTCTATGTTGCTGAAGATGAACTG 494640 Query 34634 TCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCT 34693 | ||||||||| ||||| || || | ||||||||| | || || || || ||||||||| Sbjct 494641 TACTGCCAGCTGTATCAGCGTTCAGCAGACATGGGCCTTGGAGTACCATTTAACATTGCT 494700 Query 34694 AGTTACGCTCTGCTCACGTACATG 34717 ||||| || || | || |||||| Sbjct 494701 AGTTATGCATTGTTAACATACATG 494724 Score = 98.7 bits (108), Expect = 9e-16 Identities = 216/324 (67%), Gaps = 0/324 (0%) Strand=Plus/Minus Query 6628 CATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCCATGTCTCC 6687 |||||| || | || || |||||||||||||| || || || || | ||||||||| | Sbjct 494724 CATGTATGTTAACAATGCATAACTAGCAATGTTAAATGGTACTCCAAGGCCCATGTCTGC 494665 Query 6688 CGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGGCAGAGGGT 6747 || || ||||| ||||||||| |||| || | | || || |||||||| ||| Sbjct 494664 TGAACGCTGATACAGCTGGCAGTACAGTTCATCTTCAGCAACATAGAATTGAACAAGGCA 494605 Query 6748 GTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCGCACATCACGAT 6807 ||| || || || || ||||| || | ||| | | ||||| | ||||| | || Sbjct 494604 GTGACATGGTGGAAGAGCCATTTTTGGTATATCAATGGCATTCCATGAACACATGATCAT 494545 Query 6808 CCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACGTACTGCAGCTGGTCCGCTCC 6867 | | |||| || || |||| |||| ||| || | ||||| || || | || Sbjct 494544 GCGACGATCATATGGTTTAGATTTCAGTGTGTTGATTACTTGCTGCAATTGATCAACACC 494485 Query 6868 CTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCGCCCCAAAGTGTCTCCACTGGAA 6927 || || |||||||| | | | || || | |||||||| || | |||||| || Sbjct 494484 TTGACCAGAATAGTCAGTATTCATGTCCATGTATTTGGCCCCAAAATGACGCCACTGAAA 494425 Query 6928 CCCGTAGACCGGGCCCAAGTCGCC 6951 || || || || || | ||| || Sbjct 494424 TCCATACACAGGACCAAGGTCTCC 494401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448084988948640