Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zootermopsis_20nevadensis_20[genbank_20GCA_5F000696155.1_202014-06- 05] 31,662 sequences; 485,009,472 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq70 104 2e-17 seq1183 93.3 3e-14 >seq70 Length=429657 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 |||||| | |||||||| ||||| ||||| ||| ||||| |||| || ||| | Sbjct 142350 ATGCAAGTCTTTGTGAAGACTCTCACTGGAAAAACCATTACTCTTGAAGTTGAACCATCT 142409 Query 27850 GACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGCAG 27909 ||| || || | |||| |||||| ||||| ||||| |||| | || Sbjct 142410 GACACCGTTGAAAACTTGAAACGAAAAATTCAGGACAAGGAAGGAATTCCTCCTCATCAA 142469 Query 27910 CAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACAAC 27969 ||||| ||||||||||| || || |||||||| || | |||| ||| || ||||||||| Sbjct 142470 CAACGTTTAATTTTTGCTGGCAAGCAATTGGAGGATGGCCGCACCTTATCAGATTACAAC 142529 Query 27970 ATCCAAAAAGAGAGCACTTTGCATTTGGTT 27999 ||||| ||||| || |||| |||||| Sbjct 142530 ATCCATAAAGAATCAACCCTGCACTTGGTT 142559 >seq1183 Length=31732 Score = 93.3 bits (102), Expect = 3e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 ||||| |||||| | || |||||||| || | || ||||| || || |||||||| Sbjct 15786 GACAAGGAAGGTATCCCCCCTGAGCAGCAGCGACTTATCTTTGCTGGCAAGCAATTGGAA 15727 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 || | |||| ||| || |||||||||||||| ||||| ||| | || ||||| ||| Sbjct 15726 GATGGCCGCACCTTATCAGATTACAACATCCAGAAAGAATCCACCCTCCACTTGGTATTG 15667 Query 28003 CGTTTGCGTGGCGG 28016 ||| ||||||| || Sbjct 15666 CGTCTGCGTGGTGG 15653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355725079594674