Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zootermopsis_20nevadensis_20[genbank_20GCA_5F000696155.1_202014-06- 05] 31,662 sequences; 485,009,472 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq70 176 1e-38 seq950 165 2e-35 seq623 163 7e-35 seq1183 143 6e-29 seq352 140 8e-28 seq394 86.0 1e-11 >seq70 Length=429657 Score = 176 bits (194), Expect = 1e-38 Identities = 166/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| || || || ||||| |||||||| ||||| | | ||| | ||||| Sbjct 142561 AGAACCAAGTGCAGGGTTGATTCTTTATGGATGTTGTAATCTGATAAGGTGCGGCCATCC 142502 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||| |||||||| || || || | |||||||| | |||||||| ||||||||||||| Sbjct 142501 TCCAATTGCTTGCCAGCAAAAATTAAACGTTGTTGATGAGGAGGAATTCCTTCCTTGTCC 142442 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || || ||| |||||| |||||| | ||||||||| |||||| || ||||| || || Sbjct 142441 TGAATTTTTCGTTTCAAGTTTTCAACGGTGTCAGATGGTTCAACTTCAAGAGTAATGGTT 142382 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||||||||| ||||| || ||||| Sbjct 142381 TTTCCAGTGAGAGTCTTCACAAAGACTTGCAT 142350 >seq950 Length=836093 Score = 165 bits (182), Expect = 2e-35 Identities = 169/221 (76%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| || ||||| || ||||| || || || || ||||| |||||||| | ||||| Sbjct 302158 CGAAGCCTGAGGACGAGATGAAGTGTAGATTCCTTCTGGATATTATAATCAGAGAGGGTT 302217 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | ||||| |||||||||||||| || ||||| || || || ||||| || |||| |||| Sbjct 302218 CGGCCATCCTCCAGCTGCTTGCCAGCAAAGATCAGTCGCTGCTGGTCTGGTGGAATTCCT 302277 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 |||||||| |||||||| |||||| || || || || ||||| ||| || || | | Sbjct 302278 TCCTTGTCTTGGATCTTGGCTTTCACATTCTCAATCGTATCAGATGCTTCCACTTCTAAA 302337 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| || || ||||| || || || | |||||| Sbjct 302338 GTAATGGTCTTGCCAGTCAGAGTTTTCACGAAAATCTGCAT 302378 Score = 161 bits (178), Expect = 2e-34 Identities = 163/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || |||||||| || || |||||||| ||||| |||||||| | ||||| | ||||| Sbjct 297494 AGCACAAGGTGGAGTGTAGACTCTTTCTGGATATTATAATCTGAGAGGGTTCGGCCATCC 297553 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| || ||||| || || || ||||| || |||| ||||| |||||| Sbjct 297554 TCCAGCTGCTTGCCAGCAAAGATCAGTCGCTGCTGGTCTGGTGGAATGCCTTCTTTGTCC 297613 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| ||||||||| || || || ||||| || || || ||||| || || Sbjct 297614 TGGATCTTGGCTTTCACGTTCTCAATTGTATCAGAAGCCTCTACTTCCAGAGTAATGGTT 297673 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || | || || ||||| | |||||| Sbjct 297674 TTTCCTGTCAAGGTTTTGACAAATATCTGCAT 297705 Score = 149 bits (164), Expect = 1e-30 Identities = 160/211 (76%), Gaps = 3/211 (1%) Strand=Plus/Plus Query 210905 GACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTC 210964 ||| || || || || || ||||| ||| |||| |||||| || || | |||||| || Sbjct 300666 GACCAGATGGAGTGTTGATTCTTTCTGGTTGTTGTAATCC---AGTGTGCGTCCATCCTC 300722 Query 210965 CAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTG 211024 |||||||||||| || ||||| || || ||||| ||||| |||| |||||| |||||||| Sbjct 300723 CAGCTGCTTGCCAGCAAAGATCAGTCGCTGTTGATCAGGTGGAATTCCTTCTTTGTCCTG 300782 Query 211025 GATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTT 211084 ||||| ||| || || || || || ||||| || || || | ||||| ||||| Sbjct 300783 AATCTTGGCTTTAACATTCTCAATCGTATCAGAAGCCTCTACTTCCAATGTGATTGTCTT 300842 Query 211085 TCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 || || |||||||| ||||| | ||||||| Sbjct 300843 GCCTGTCAGAGTCTTAACAAAGATCTGCATT 300873 Score = 136 bits (150), Expect = 9e-27 Identities = 123/155 (79%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| || ||||| |||||||| || || || || ||||| |||||||| | ||||| Sbjct 297713 CGAAGCCTGAGGACGAGGTGAAGTGTAGATTCCTTCTGGATATTATAATCTGAGAGGGTT 297772 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | ||||| |||||||| ||||| || ||||| || || || ||||| || |||| |||| Sbjct 297773 CGGCCATCCTCCAGCTGTTTGCCAGCAAAGATCAGTCGCTGCTGGTCTGGTGGAATTCCT 297832 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGAT 211048 || |||||||||||||| ||||||||| || || Sbjct 297833 TCTTTGTCCTGGATCTTGGCTTTCACGTTCTCAAT 297867 Score = 123 bits (136), Expect = 6e-23 Identities = 115/146 (79%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || |||||||| || || |||||||| |||||||| || || | | || | ||||| Sbjct 298987 AGCACAAGGTGGAGTGTAGACTCTTTCTGGATGTTGTAGTCTGACAAAGTTCGGCCATCC 299046 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| || ||||| || || || ||||| || |||| |||||||||||| Sbjct 299047 TCCAGCTGCTTGCCAGCAAAGATCAGTCGCTGCTGGTCTGGTGGAATGCCTTCCTTGTCC 299106 Query 211023 TGGATCTTTTGTTTCACGTTTTCGAT 211048 |||||||| ||||||||| || || Sbjct 299107 TGGATCTTGGCTTTCACGTTCTCAAT 299132 Score = 118 bits (130), Expect = 2e-21 Identities = 140/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 210925 CTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGA 210984 |||| |||||||| || |||| | || | |||||||||||||||||||| || |||| Sbjct 301961 CTTTCTGGATGTTGTAGTCCGACAAAGTTCGGCCATCTTCCAGCTGCTTGCCAGCAAAGA 302020 Query 210985 TAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTT 211044 | || || || ||||| || |||| ||||||||||| |||||||| |||||| || | Sbjct 302021 TCAGTCGCTGCTGGTCTGGTGGAATGCCTTCCTTGTCTTGGATCTTGGCTTTCACATTCT 302080 Query 211045 CGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAA 211104 | || || || || || || || | ||| ||||| || || || | || || || | Sbjct 302081 CAATCGTATCTGATGCCTCCACTTCCAAAGTAATCGTTTTGCCTGTCAAGGTTTTGACGA 302140 Query 211105 ACACCTGCAT 211114 | | |||||| Sbjct 302141 ATATCTGCAT 302150 >seq623 Length=111817 Score = 163 bits (180), Expect = 7e-35 Identities = 158/203 (78%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 || || || || ||||| |||||||| ||||| | | ||| | ||||| |||| ||| Sbjct 107672 TGCAGGGTTGATTCTTTCTGGATGTTGTAATCTGATAAGGTACGGCCATCCTCCAATTGC 107731 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 ||||| || |||||||| || || ||| ||||||| | ||||||||||||||||||||| Sbjct 107732 TTGCCAGCAAAGATAAGTCGCTGCTGGCCAGGAGGGATACCTTCCTTGTCCTGGATCTTT 107791 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091 ||||||||| || ||||| |||| || ||||| |||||||| ||||| || || Sbjct 107792 GCTTTCACGTTCTCAATGGTATCAGCTGGCTCTACCTCCAGAGTGATGGTCTTCCCTGTC 107851 Query 211092 AGAGTCTTTACAAACACCTGCAT 211114 || ||||| ||||| | |||||| Sbjct 107852 AGGGTCTTCACAAAAATCTGCAT 107874 Score = 163 bits (180), Expect = 7e-35 Identities = 150/190 (79%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 210925 CTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGA 210984 |||| || || || || || | ||| || | |||||||||| |||||| ||||| || | Sbjct 110330 CTTTCTGTATATTGTAGTCAGAAAGTGTACGACCATCTTCCAACTGCTTTCCTGCAAAAA 110389 Query 210985 TAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTT 211044 | | |||||||| |||||||||| ||||||||||||||| || ||| ||| ||||||| Sbjct 110390 TTAAACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCCTGAATTTTTGCTTTAACGTTTT 110449 Query 211045 CGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAA 211104 | ||||||||||| |||| || || ||| | || || ||||| ||||||||||| |||| Sbjct 110450 CAATGGTGTCAGACGTTTCCACTTCAAGAATAATGGTTTTTCCAGTGAGAGTCTTCACAA 110509 Query 211105 ACACCTGCAT 211114 | | ||||| Sbjct 110510 AGATTTGCAT 110519 >seq1183 Length=31732 Score = 143 bits (158), Expect = 6e-29 Identities = 154/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 ||| || ||||| ||||| |||||||| ||||| | | ||| | |||||||||| || Sbjct 15676 GTGGAGGGTGGATTCTTTCTGGATGTTGTAATCTGATAAGGTGCGGCCATCTTCCAATTG 15735 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 |||||| || |||||||| || || || ||||| || | |||||||||||||| | ||| Sbjct 15736 CTTGCCAGCAAAGATAAGTCGCTGCTGCTCAGGGGGGATACCTTCCTTGTCCTGCAGCTT 15795 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 || || | || || ||||| |||| || ||||| |||||||| ||||| || || Sbjct 15796 TTTCTTTAGATTCTCAATGGTATCAGCTGGCTCTACCTCCAGAGTGATGGTCTTCCCTGT 15855 Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114 || ||||| || || | |||||| Sbjct 15856 CAGGGTCTTCACGAAAATCTGCAT 15879 Score = 134 bits (148), Expect = 3e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| || || || |||| |||||||| ||||| | | ||| | |||||| Sbjct 15440 AGAACCAAGTGCAGGGTTGATCCTTTCTGGATGTTGTAATCTGATAAGGTGCGGCCATCT 15499 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||| |||||||| || || ||||| || || || ||||| || | |||||||||||| Sbjct 15500 TCCAATTGCTTGCCAGCAAACATAAGTCGCTGCTGCTCAGGGGGGATACCTTCCTTGTCC 15559 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || | ||||| || | || || ||||| |||| || ||||| |||||||| ||| Sbjct 15560 TGCAGCTTTTTCTTTAGATTCTCAATGGTATCAGCTGGCTCTACCTCCAGAGTGATGGTC 15619 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || ||||| ||||| | |||||| Sbjct 15620 TTCCCTGTCAGGGTCTTCACAAAAATCTGCAT 15651 Score = 120 bits (132), Expect = 7e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 210925 CTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGA 210984 |||| || || || || || | || || | |||||| || |||||| ||||| || Sbjct 17238 CTTTCTGTATATTGTAGTCAGAGAGTGTACGATCATCTTTCAACTGCTTTCCTGCAAAAT 17297 Query 210985 TAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTT 211044 | | |||||||| |||| |||| ||||||||| |||| | | |||||||||||||| Sbjct 17298 TTAATCGTTGTTGATCAGAGGGAATTCCTTCCTTTTCCTCTAGATGTTGTTTCACGTTTT 17357 Query 211045 CGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAA 211104 | |||||||| || |||||| || ||||| || ||||| |||||||| || |||| Sbjct 17358 CAATGGTGTCTGAAGGTTCAACTTCAAGAGTACAGGTTTTTCCAGTGAGAGTTTTCACAA 17417 Query 211105 ACACCTGCATT 211115 | | |||||| Sbjct 17418 AGATTTGCATT 17428 >seq352 Length=269356 Score = 140 bits (154), Expect = 8e-28 Identities = 145/190 (76%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 210925 CTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGA 210984 |||| || || || || || | || || | |||||||||| |||||| ||||| || | Sbjct 29305 CTTTCTGTATATTGTAGTCAGAAATTGTACGACCATCTTCCAACTGCTTTCCTGCAAAAA 29364 Query 210985 TAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTT 211044 | | |||||||| ||||| |||| |||||||||||| | || || ||||||||| || Sbjct 29365 TTAAACGTTGTTGATCAGGGGGAATTCCTTCCTTGTCGTTGAGTTTGCGTTTCACGTCTT 29424 Query 211045 CGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAA 211104 | ||||||||| | |||| || || ||||| | || ||||| ||||||||||| |||| Sbjct 29425 CAATGGTGTCAAACGTTTCCACTTCAAGAGTAACGGTTTTTCCAGTGAGAGTCTTCACAA 29484 Query 211105 ACACCTGCAT 211114 | | ||||| Sbjct 29485 AGATTTGCAT 29494 Score = 95.1 bits (104), Expect = 3e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 210975 CCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGT 211034 || || |||||||| || || |||||||| || | || ||||||||||| | ||||| Sbjct 26147 CCAGCAAAGATAAGTCGCTGCTGGTCAGGGGGTATGCCCTCCTTGTCCTGCAGCTTTTTC 26206 Query 211035 TTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGA 211094 || || || ||||| |||| | || ||||| |||||||| ||||| || || || Sbjct 26207 TTTACAGCCTCAATGGTATCAGCTGTCTCTACCTCCAGAGTGATGGTCTTCCCTGTCAGG 26266 Query 211095 GTCTTTACAAACACCTGCAT 211114 ||||| ||||| | |||||| Sbjct 26267 GTCTTCACAAAAATCTGCAT 26286 >seq394 Length=806705 Score = 86.0 bits (94), Expect = 1e-11 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 ||||||||||| || ||||| |||||| ||||| || || ||||| |||||||| Sbjct 96351 CCTTCCTTGTCTTGAATCTTGGCTTTCACATTTTCAATAGTATCAGATGCCTCAACCTCT 96292 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || ||||| || || || || || ||||| ||||| | ||||||||| Sbjct 96291 AGGGTGATGGTTTTCCCAGTAAGTGTCTTCACAAAGATCTGCATTTT 96245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1158681767532630