Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zootermopsis_20nevadensis_20[genbank_20GCA_5F000696155.1_202014-06- 05] 31,662 sequences; 485,009,472 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq950 165 2e-35 seq1183 125 2e-23 seq583 120 7e-22 seq7201 113 1e-19 seq623 111 4e-19 seq70 104 6e-17 seq1832 95.1 3e-14 seq1068 95.1 3e-14 seq352 91.5 4e-13 >seq950 Length=836093 Score = 165 bits (182), Expect = 2e-35 Identities = 169/221 (76%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||| || ||||| || || || || ||||| || |||| ||| ||||| | | ||| Sbjct 302158 CGAAGCCTGAGGACGAGATGAAGTGTAGATTCCTTCTGGATATTATAATCAGAGAGGGTT 302217 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | ||||| || |||||||| ||||| ||||| ||||| || ||||| || ||||| ||| Sbjct 302218 CGGCCATCCTCCAGCTGCTTGCCAGCAAAGATCAGTCGCTGCTGGTCTGGTGGAATTCCT 302277 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 ||||||||||||||||| |||||| || || || || || | |||||| ||||| Sbjct 302278 TCCTTGTCTTGGATCTTGGCTTTCACATTCTCAATCGTATCAGATGCTTCCACTTCTAAA 302337 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || |||||||| |||| |||||| | ||| | ||||| Sbjct 302338 GTAATGGTCTTGCCAGTCAGAGTTTTCACGAAAATCTGCAT 302378 Score = 154 bits (170), Expect = 4e-32 Identities = 148/190 (78%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 225524 CTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGA 225583 |||| |||| ||||| || | |||||||| |||||||| |||||||| ||||| |||| Sbjct 301961 CTTTCTGGATGTTGTAGTCCGACAAAGTTCGGCCATCTTCCAGCTGCTTGCCAGCAAAGA 302020 Query 225584 TAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTT 225643 | ||||| || ||||| || ||||| |||||||||||||||||||| |||||| | Sbjct 302021 TCAGTCGCTGCTGGTCTGGTGGAATGCCTTCCTTGTCTTGGATCTTGGCTTTCACATTCT 302080 Query 225644 CGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGA 225703 | || || ||||| | ||||| || || || ||||| ||||| ||||| ||||| | || Sbjct 302081 CAATCGTATCTGATGCCTCCACTTCCAAAGTAATCGTTTTGCCTGTCAAGGTTTTGACGA 302140 Query 225704 ACACTTGCAT 225713 | | ||||| Sbjct 302141 ATATCTGCAT 302150 Score = 127 bits (140), Expect = 5e-24 Identities = 105/128 (82%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || ||||||||||| || || ||||| |||| ||||| || | |||||||| ||||| Sbjct 298987 AGCACAAGGTGGAGTGTAGACTCTTTCTGGATGTTGTAGTCTGACAAAGTTCGGCCATCC 299046 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||| ||||| ||||| || ||||| || ||||| ||||||||||| Sbjct 299047 TCCAGCTGCTTGCCAGCAAAGATCAGTCGCTGCTGGTCTGGTGGAATGCCTTCCTTGTCC 299106 Query 225622 TGGATCTT 225629 |||||||| Sbjct 299107 TGGATCTT 299114 Score = 122 bits (134), Expect = 2e-22 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || ||||||||||| || || ||||| |||| ||| ||||| | | |||| ||||| Sbjct 297494 AGCACAAGGTGGAGTGTAGACTCTTTCTGGATATTATAATCTGAGAGGGTTCGGCCATCC 297553 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||| ||||| ||||| || ||||| || ||||| ||||| ||||| Sbjct 297554 TCCAGCTGCTTGCCAGCAAAGATCAGTCGCTGCTGGTCTGGTGGAATGCCTTCTTTGTCC 297613 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||||| || || || || || | || || || | || || || Sbjct 297614 TGGATCTTGGCTTTCACGTTCTCAATTGTATCAGAAGCCTCTACTTCCAGAGTAATGGTT 297673 Query 225682 TTGCCCGTCAAAGTTTT 225698 || || ||||| ||||| Sbjct 297674 TTTCCTGTCAAGGTTTT 297690 >seq1183 Length=31732 Score = 125 bits (138), Expect = 2e-23 Identities = 161/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | || || | |||||| ||||||||||| |||| |||||||| | || || Sbjct 15658 ACGCAGACGCAATACCAAGTGGAGGGTGGATTCTTTCTGGATGTTGTAATCTGATAAGGT 15717 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| | ||||| ||||| ||||||||||| || || || || || ||||| Sbjct 15718 GCGGCCATCTTCCAATTGCTTGCCAGCAAAGATAAGTCGCTGCTGCTCAGGGGGGATACC 15777 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||| || | ||||| ||| | | || ||||| || | | || || || | Sbjct 15778 TTCCTTGTCCTGCAGCTTTTTCTTTAGATTCTCAATGGTATCAGCTGGCTCTACCTCCAG 15837 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| ||||| || |||| || || | ||| | ||||| Sbjct 15838 AGTGATGGTCTTCCCTGTCAGGGTCTTCACGAAAATCTGCAT 15879 Score = 104 bits (114), Expect = 6e-17 Identities = 137/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | ||| || || ||| |||| |||| |||||||| | || || | |||||| Sbjct 15440 AGAACCAAGTGCAGGGTTGATCCTTTCTGGATGTTGTAATCTGATAAGGTGCGGCCATCT 15499 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || | ||||| ||||| || |||||||| || || || || || |||||||||||||| Sbjct 15500 TCCAATTGCTTGCCAGCAAACATAAGTCGCTGCTGCTCAGGGGGGATACCTTCCTTGTCC 15559 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || | ||||| ||| | | || ||||| || | | || || || | ||||| ||| Sbjct 15560 TGCAGCTTTTTCTTTAGATTCTCAATGGTATCAGCTGGCTCTACCTCCAGAGTGATGGTC 15619 Query 225682 TTGCCCGTCA 225691 || || |||| Sbjct 15620 TTCCCTGTCA 15629 >seq583 Length=527131 Score = 120 bits (132), Expect = 7e-22 Identities = 140/189 (74%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585 || || | ||| ||||| | ||| || | |||||||||| ||||||||||| ||||| Sbjct 233046 TTCTGAATATTATAATCCGACAACGTGCGACCATCTTCTAATTGCTTCCCAGCAAAGATC 232987 Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645 | ||| |||||||| || || |||||||| || ||||| ||||| ||| ||| ||| Sbjct 232986 AATCGCTGTTGGTCCGGTGGGATACCTTCTTTATCTTGAATCTTAGCCTTGACATTTTCT 232927 Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAAC 225705 ||||| || || | || || || | || || || || ||||| | ||||||| ||| Sbjct 232926 ATGGTATCCGACGCCTCAACTTCGAGGGTTATAGTTTTACCCGTTAGGGTTTTTACGAAA 232867 Query 225706 ACTTGCATT 225714 | ||||||| Sbjct 232866 ATTTGCATT 232858 >seq7201 Length=1274 Score = 113 bits (124), Expect = 1e-19 Identities = 201/292 (69%), Gaps = 6/292 (2%) Strand=Plus/Plus Query 7440 AACGTTATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGAT 7499 ||| |||||||| | |||||| | || ||||| | ||||||| || ||| | || Sbjct 93 AACTTTATATTTTGTTTTTGGTTTATGATCAGGTATGGTTGGTACTAGTTTATCTTTAAT 152 Query 7500 TATAAGGTTAGAATTAGCTGCTCCGGGTTCTCAAATATTGAGTGGTAATAGCCAACTTTA 7559 ||| | |||||||||||| || ||| | | || || | ||| | ||| | || Sbjct 153 TATTCGTTTAGAATTAGCTAAACCAGGTATT----TTTTTAGGG--AATGGTCAATTATA 206 Query 7560 CAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTAT 7619 || | ||||||| || ||||| || | || ||||| ||| | ||||| || || Sbjct 207 TAATTCTGTTATTACTGCTCATGCTCTTTTAATAATTTTTTTTATAGTTATACCTAGAAT 266 Query 7620 GATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTT 7679 || || ||||| || |||||| | | |||||||| | |||||||||||||| ||| Sbjct 267 AATTGGTGGTTTTGGTAATTGAATATTACCTTTAATATTAGGTGCTCCTGATATAAGTTT 326 Query 7680 TCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATTTCTA 7731 ||| | | || ||| |||| ||||| ||| |||| | | |||||| || Sbjct 327 TCCTCGTTTAAATAATTTAAGATTTTGGTTATTACCAACAGCTTTATTTTTA 378 Score = 84.2 bits (92), Expect = 5e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731 |||||||||||||||||| || |||||||||||||||| | ||||| || || Sbjct 767 TTCAGGATGACCAAAAAACCAAAATAAATGTTGATAAATTAAAGGATTACCACCAGTACT 708 Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA 370770 |||||||||||| |||||| ||||| | |||||| || Sbjct 707 TGGATCAAAAAATGAAGTATTTAAATTACGATCAGTCAA 669 >seq623 Length=111817 Score = 111 bits (122), Expect = 4e-19 Identities = 133/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570 || || || |||||||| |||| |||||||| | || || | ||||| || | ||| Sbjct 107672 TGCAGGGTTGATTCTTTCTGGATGTTGTAATCTGATAAGGTACGGCCATCCTCCAATTGC 107731 Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630 || ||||| ||||||||||| || ||| | || || |||||||||||||| ||||||||| Sbjct 107732 TTGCCAGCAAAGATAAGTCGCTGCTGGCCAGGAGGGATACCTTCCTTGTCCTGGATCTTT 107791 Query 225631 TGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTC 225690 ||||| || ||||| || | | || || || | ||||| ||||| || ||| Sbjct 107792 GCTTTCACGTTCTCAATGGTATCAGCTGGCTCTACCTCCAGAGTGATGGTCTTCCCTGTC 107851 Query 225691 A 225691 | Sbjct 107852 A 107852 Score = 95.1 bits (104), Expect = 3e-14 Identities = 137/191 (72%), Gaps = 2/191 (1%) Strand=Plus/Plus Query 225524 CTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGA 225583 |||| || | |||||| || | | || | |||||||| | |||||| || || || | Sbjct 110330 CTTTCTGTATATTGTAGTCAGAAAGTGTACGACCATCTTCCAACTGCTTTCCTGCAAAAA 110389 Query 225584 TAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGC-TTCACAGCT 225642 | | |||||||| || || ||||| ||||||||||| || || |||||| || || | Sbjct 110390 TTAAACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCCTGAAT-TTTTGCTTTAACGTTT 110448 Query 225643 TCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATG 225702 || |||||||| || |||||||| || | | || || || || || | ||| || | Sbjct 110449 TCAATGGTGTCAGACGTTTCCACTTCAAGAATAATGGTTTTTCCAGTGAGAGTCTTCACA 110508 Query 225703 AACACTTGCAT 225713 || | |||||| Sbjct 110509 AAGATTTGCAT 110519 >seq70 Length=429657 Score = 104 bits (114), Expect = 6e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | ||| || || |||||||| |||| |||||||| | || || | ||||| Sbjct 142561 AGAACCAAGTGCAGGGTTGATTCTTTATGGATGTTGTAATCTGATAAGGTGCGGCCATCC 142502 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || | ||||| ||||| || || | |||||||| | || ||||| ||||||||||| Sbjct 142501 TCCAATTGCTTGCCAGCAAAAATTAAACGTTGTTGATGAGGAGGAATTCCTTCCTTGTCC 142442 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || || ||| | |||| ||| | |||||| || | ||| || || | || || || Sbjct 142441 TGAATTTTTCGTTTCAAGTTTTCAACGGTGTCAGATGGTTCAACTTCAAGAGTAATGGTT 142382 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || | ||| || | || |||||||| Sbjct 142381 TTTCCAGTGAGAGTCTTCACAAAGACTTGCAT 142350 >seq1832 Length=15190 Score = 95.1 bits (104), Expect = 3e-14 Identities = 81/100 (81%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 370673 TCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGAT 370732 ||||||||||||||||| ||||| |||||||| || | |||||||| || || ||| Sbjct 8190 TCAGGATGACCAAAAAACCAGAACAAATGTTGGTACAAAATAGGATCACCCCCACCTACA 8249 Query 370733 GGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAAAA 370772 || ||||| || | ||||||||||| | ||||||||||| Sbjct 8250 GGGTCAAAGAAAGTTGTATTAAAATTACGATCAGTTAAAA 8289 >seq1068 Length=143541 Score = 95.1 bits (104), Expect = 3e-14 Identities = 132/183 (72%), Gaps = 4/183 (2%) Strand=Plus/Plus Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570 || || || |||| ||| |||| |||||||| | ||||| | ||||| || | ||| Sbjct 133797 TGCAGGGTTGATTATTTCTGGATGTTGTAATCTGATAAAGTGCGGCCATCCTCCAATTGC 133856 Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630 || ||||| |||| |||||| | ||||| || || ||||||||||| || |||| |||| Sbjct 133857 TTGCCAGCAAAGACAAGTCGCTACTGGTCAGGGGGGATACCTTCCTTTTCCTGGAGCTTT 133916 Query 225631 TGCTTCACAGCTTCGATGGTGTCTGAGGTT--TCCACGTCTAACGTGATCGTCTTGCCCG 225688 ||| ||| || ||| || | || || || || || | ||||| ||||| || | Sbjct 133917 GCCTTTACATTCTCAATG--GTATTAGCTTGCTCTACCTCCAGAGTGATGGTCTTCCCTG 133974 Query 225689 TCA 225691 ||| Sbjct 133975 TCA 133977 >seq352 Length=269356 Score = 91.5 bits (100), Expect = 4e-13 Identities = 134/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 225524 CTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGA 225583 |||| || | |||||| || | | || | |||||||| | |||||| || || || | Sbjct 29305 CTTTCTGTATATTGTAGTCAGAAATTGTACGACCATCTTCCAACTGCTTTCCTGCAAAAA 29364 Query 225584 TAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTT 225643 | | |||||||| || || ||||| ||||||||||| | || || | ||||| ||| Sbjct 29365 TTAAACGTTGTTGATCAGGGGGAATTCCTTCCTTGTCGTTGAGTTTGCGTTTCACGTCTT 29424 Query 225644 CGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGA 225703 | |||||||| | |||||||| || | || | || || || || | ||| || | | Sbjct 29425 CAATGGTGTCAAACGTTTCCACTTCAAGAGTAACGGTTTTTCCAGTGAGAGTCTTCACAA 29484 Query 225704 ACACTTGCAT 225713 | | |||||| Sbjct 29485 AGATTTGCAT 29494 Score = 87.8 bits (96), Expect = 4e-12 Identities = 90/118 (76%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 225574 CCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGC 225633 ||||| ||||||||||| || ||||| || || || || |||||||| || | ||||| | Sbjct 26147 CCAGCAAAGATAAGTCGCTGCTGGTCAGGGGGTATGCCCTCCTTGTCCTGCAGCTTTTTC 26206 Query 225634 TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCA 225691 || ||||| || ||||| || | || || || || | ||||| ||||| || |||| Sbjct 26207 TTTACAGCCTCAATGGTATCAGCTGTCTCTACCTCCAGAGTGATGGTCTTCCCTGTCA 26264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192047426613428