Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zootermopsis_20nevadensis_20[genbank_20GCA_5F000696155.1_202014-06- 05] 31,662 sequences; 485,009,472 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq513 132 7e-26 seq95 111 2e-19 >seq513 Length=652068 Score = 132 bits (146), Expect = 7e-26 Identities = 139/183 (76%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 48410 GTAAGTATCTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAA 48469 ||| ||||| || || | ||||||||||| || || | |||||| || || |||||||| Sbjct 207376 GTAGGTATCAATCAACAAGCTATACATTTCTGAATGGACATTTTCCATCGCTATCTGAAA 207435 Query 48470 TCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATT 48529 || || || ||||| |||||||| | ||||| ||| | |||| || ||||||| Sbjct 207436 GCCATAGAAGCATCTTGCTTCTGTTACTTGTACTTCCTGGCTGAATCTCTCTACCAAATT 207495 Query 48530 CTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTT 48589 |||||| || |||||||| ||| ||||||||||||| |||||| ||||||| | | Sbjct 207496 CTCATTAACAATTCCATCTGAAGCTGCAAAAAATGCTAGTACATGGGAGATAAAATGTCT 207555 Query 48590 TTC 48592 ||| Sbjct 207556 TTC 207558 Score = 104 bits (114), Expect = 3e-17 Identities = 138/191 (72%), Gaps = 3/191 (2%) Strand=Plus/Plus Query 48192 AATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCA 48251 || |||||||||||||| ||||| || || || | ||| || || || || ||| |||| Sbjct 206575 AAGGTGAGACCGGGCATAAGTCCCCGCTTCTTTAACCAGAAGATAGCAGCAAAACTTCCA 206634 Query 48252 GAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGC---T 48308 || ||||| || ||||| || || ||||| || | |||||| || | | || | Sbjct 206635 GAGAAGAAGATACCTTCCACTGCAGCAAACGCAACCACTCTCTCACCAAACGTCGCAGTT 206694 Query 48309 TCGTTGTGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCT 48368 |||| ||||||| | | |||||||| |||||||| || ||||| ||||| || || Sbjct 206695 TCGTGCGCTATCCACTGAAGGGCCCAATCTGCCTTCTTTTTCACACACGGCATCGTCTCA 206754 Query 48369 ATAGCATTAAA 48379 | || ||||| Sbjct 206755 ACGGCGTTAAA 206765 >seq95 Length=16868 Score = 111 bits (122), Expect = 2e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 78153 TTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATA 78212 ||||| || || || || | ||||| || ||||| ||||||||||||||||| || | | Sbjct 7354 TTATTGCCACCTTGGTCCACATATCGTGCTGTGTTGTTATAAACTCTCAACATAGGCACA 7413 Query 78213 ATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTA 78272 || || || || || ||||| || |||| ||||| || | ||||| |||||| Sbjct 7414 ATGCCATTCGAAGTGCCATTGGTGCCAGCTATATACGAGCCTGTAGCGCGGATATTATGG 7473 Query 78273 ATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCG 78332 ||| | || ||||| || || |||||| || || || || |||||| ||| || Sbjct 7474 ATGTGGAGTCCGATTCCACCAGCAGACTTAGAAATCAGTGCACATTGTTTCAGTGTGTCA 7533 Query 78333 TAGATACCCTCTATACTGTCATCCATCAT 78361 || || ||||| || ||||| ||| |||| Sbjct 7534 TAAATTCCCTCAATGCTGTCGTCCTTCAT 7562 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694393867455680