Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zootermopsis_20nevadensis_20[genbank_20GCA_5F000696155.1_202014-06- 05] 31,662 sequences; 485,009,472 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq513 127 3e-24 seq95 111 2e-19 >seq513 Length=652068 Score = 127 bits (140), Expect = 3e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 46900 TATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAAT 46959 || ||||| || || | ||||||||||||||||| | ||||| || || |||||||| Sbjct 207377 TAGGTATCAATCAACAAGCTATACATTTCTGAATGGACATTTTCCATCGCTATCTGAAAG 207436 Query 46960 CCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCAGACAAATTC 47019 || || || ||||||||||| || | ||||| || | |||| || ||||||| Sbjct 207437 CCATAGAAGCATCTTGCTTCTGTTACTTGTACTTCCTGGCTGAATCTCTCTACCAAATTC 207496 Query 47020 TCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAAATATTTT 47079 ||||| || |||||||| ||| ||||||||||| | |||||| ||||||| | || Sbjct 207497 TCATTAACAATTCCATCTGAAGCTGCAAAAAATGCTAGTACATGGGAGATAAAATGTCTT 207556 Query 47080 TCATCGGTAGTCAGTTTATTCCA 47102 ||||| ||||| | ||||| Sbjct 207557 TCATCTTCTGTCAGCATGTTCCA 207579 >seq95 Length=16868 Score = 111 bits (122), Expect = 2e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 76748 TTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATA 76807 ||||| || || || || | ||||| || ||||| ||||||||||||||||| || | | Sbjct 7354 TTATTGCCACCTTGGTCCACATATCGTGCTGTGTTGTTATAAACTCTCAACATAGGCACA 7413 Query 76808 ATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTA 76867 ||||| || || || ||||| || |||| ||||| || || || |||||| Sbjct 7414 ATGCCATTCGAAGTGCCATTGGTGCCAGCTATATACGAGCCTGTAGCGCGGATATTATGG 7473 Query 76868 ATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCA 76927 || || || ||||| || || ||||| || || ||||| |||||| ||||||| Sbjct 7474 ATGTGGAGTCCGATTCCACCAGCAGACTTAGAAATCAGTGCACATTGTTTCAGTGTGTCA 7533 Query 76928 TAGATGCCCTCTATACTATCATCCATCAT 76956 || || ||||| || || || ||| |||| Sbjct 7534 TAAATTCCCTCAATGCTGTCGTCCTTCAT 7562 Score = 98.7 bits (108), Expect = 1e-15 Identities = 133/183 (73%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 76550 CCAGGACATTCATTCGGACACATCAATGACCAC-TCACCATCTTCCTTAACCCGTTTCAT 76608 |||||||| ||| ||||||||||| |||| || | | || ||| || || ||||| Sbjct 6594 CCAGGACAAGCATGCGGACACATCAGACTCCACATCTCGTTGTT-CTTCACTCGCTTCAT 6652 Query 76609 AAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCC 76668 ||| |||||||| ||||| |||||| || ||||| || | || | ||| || || || Sbjct 6653 AAATAGATCAGGAATCCACAGAGCATAGAAAAGATCCCGAGCTCGAATTTCCTCTTTCCC 6712 Query 76669 TGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATAT 76728 || || || || || || || ||||| | | ||| | |||||| ||||| ||||| || Sbjct 6713 CGTGTTTTTCTTCAGGTCAAGAAACTCAAACACATCTGCATGCCAGGGTTCCAGATAAAT 6772 Query 76729 CGC 76731 || Sbjct 6773 GGC 6775 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712652238387840